ZNF197 (Callithrix jacchus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCJAG00000001817 T089229_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF197
M07684_2.00 		Homo sapiens
YBBBYYYYTGWCYYY
RRRGWCARRRRVVVR		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF197.RCADE.ReprocessedData 		0.824 0.986
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000003266 C2H2 ZF 368 390
ENSCJAP00000003266 C2H2 ZF 396 418
ENSCJAP00000003266 C2H2 ZF 424 446
ENSCJAP00000003266 C2H2 ZF 452 474
ENSCJAP00000003266 C2H2 ZF 480 502
ENSCJAP00000003266 C2H2 ZF 508 530
ENSCJAP00000003266 C2H2 ZF 536 558
ENSCJAP00000003266 C2H2 ZF 564 586
ENSCJAP00000003266 C2H2 ZF 592 614
ENSCJAP00000003266 C2H2 ZF 620 642
ENSCJAP00000003266 C2H2 ZF 648 670
ENSCJAP00000003266 C2H2 ZF 676 698
ENSCJAP00000003266 C2H2 ZF 704 726
ENSCJAP00000003266 C2H2 ZF 732 754
ENSCJAP00000003266 C2H2 ZF 760 782
ENSCJAP00000003266 C2H2 ZF 788 810
ENSCJAP00000003266 C2H2 ZF 816 838
ENSCJAP00000003266 C2H2 ZF 844 866
ENSCJAP00000003266 C2H2 ZF 872 894
ENSCJAP00000003266 C2H2 ZF 900 922
ENSCJAP00000003266 C2H2 ZF 928 950
ENSCJAP00000003266 C2H2 ZF 956 978

Links

Other C2H2 ZF family TFs
Other Callithrix jacchus TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gene22916-v1.0-hybrid Fragaria vesca gene22916-v1.0-hybrid I
LjSGA_126766.1 Lotus japonicus LjSGA_126766.1 I
LjSGA_107301.1 Lotus japonicus LjSGA_107301.1 I
chr6.LjT19B22.120.nd Lotus japonicus chr6.LjT19B22.120.nd I
Thhalv10024119m.g Eutrema salsugineum Thhalv10024119m.g I
Thhalv10023873m.g Eutrema salsugineum Thhalv10023873m.g I
SapurV1A.0066s0310 Salix purpurea SapurV1A.0066s0310 I
MDP0000846004 Malus domestica MDP0000846004 I
Gorai.013G168300 Gossypium raimondii Gorai.013G168300 I
gene22967-v1.0-hybrid Fragaria vesca gene22967-v1.0-hybrid I
Bra018490 Brassica rapa Bra018490 I
Bostr.2570s0082 Boechera stricta Bostr.2570s0082 I
Cucsa.050930 Cucumis sativus Cucsa.050930 I
cassava19828.m1 Manihot esculenta cassava19828.m1 I
Cla009163 Citrullus lanatus Cla009163 I
Cla005226 Citrullus lanatus Cla005226 I
VIT_14s0060g00300 Vitis vinifera VIT_14s0060g00300 I
TCM_026842 Theobroma cacao TCM_026842 I
POPTR_0013s01880 Populus trichocarpa POPTR_0013s01880 I
POPTR_0013s00350 Populus trichocarpa POPTR_0013s00350 I
POPTR_0005s00420 Populus trichocarpa POPTR_0005s00420 I
Gorai.013G210600 Gossypium raimondii Gorai.013G210600 N
Gorai.013G210700 Gossypium raimondii Gorai.013G210700 N