GLI1 (Pan troglodytes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPTRG00000005133 T107837_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Gli1
M01023_2.00 		Mus musculus
NGACCACCHN
NDGGTGGTCN		 PBM
Peterson et al.(2012)
Gli1 		0.827 1.000
GLI1
M02643_2.00 		Homo sapiens
GACCACCCAMG
CKTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI1 		0.827 1.000
Gli1
M08976_2.00 		Mus musculus
RGRCCACCCASV
BSTGGGTGGYCY		 Misc
Kulakovskiy et al.(2013)
GLI1_MOUSE.H11MO.0.C 		0.827 1.000
GLI1
M10176_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q2 		0.827 1.000
GLI1
M10177_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q3_01 		0.827 1.000
GLI1
M10178_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q3 		0.827 1.000
GLI1
M10179_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI_Q6 		0.827 1.000
GLI3
M04416_2.00 		Homo sapiens
VGACCACCCACVNHG
CDNBGTGGGTGGTCB		 SELEX
Yin et al.(2017)
GLI3_eDBD_HT-SELEX 		0.796 0.886
GLI3
M02642_2.00 		Homo sapiens
GACCACCCANK
MNTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI3 		0.796 0.886
GLI3
M08875_2.00 		Homo sapiens
VRACCACCCAV
BTGGGTGGTYB		 Misc
Kulakovskiy et al.(2013)
GLI3_HUMAN.H11MO.0.B 		0.796 0.886
GLI3
M10167_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI3_01 		0.796 0.886
GLI3
M10168_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI3_Q5_01 		0.796 0.886
GLI3
M04417_2.00 		Homo sapiens
CWHBGTGGGTGGTCY
RGACCACCCACVDWG		 SELEX
Yin et al.(2017)
GLI3_eDBD_Methyl-HT-SELEX 		0.796 0.886
Gli2
M01024_2.00 		Mus musculus
NGACCACCYN
NRGGTGGTCN		 PBM
Peterson et al.(2012)
Gli2 		0.779 0.851
GLI2
M02875_2.00 		Homo sapiens
GMCCACMCANVNHB
VDNBNTGKGTGGKC		 SELEX
Jolma et al.(2013)
GLI2_1 		0.779 0.851
GLI2
M02876_2.00 		Homo sapiens
GCGACCACVCWR
YWGBGTGGTCGC		 SELEX
Jolma et al.(2013)
GLI2_2 		0.779 0.851
GLI2
M02732_2.00 		Homo sapiens
GACCACMCAN
NTGKGTGGTC		 SELEX
Jolma et al.(2010)
GLI2_monomer 		0.779 0.851
GLI2
M04402_2.00 		Homo sapiens
VGACCACCCACVDHG
CDHBGTGGGTGGTCB		 SELEX
Yin et al.(2017)
GLI2_eDBD_HT-SELEX 		0.779 0.851
GLI2
M02641_2.00 		Homo sapiens
GACCACCCAHG
CDTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI2 		0.779 0.851
GLI2
M10114_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI2_Q3 		0.779 0.851
GLI2
M10115_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI2_Q6 		0.779 0.851
GLI2
M04403_2.00 		Homo sapiens
RGACCACCCACVWWG
CWWBGTGGGTGGTCY		 SELEX
Yin et al.(2017)
GLI2_eDBD_Methyl-HT-SELEX 		0.779 0.851
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000008727 C2H2 ZF 236 260
ENSPTRP00000008727 C2H2 ZF 268 295
ENSPTRP00000008727 C2H2 ZF 301 325
ENSPTRP00000008727 C2H2 ZF 331 356
ENSPTRP00000008727 C2H2 ZF 362 387

Links

Other C2H2 ZF family TFs
Other Pan troglodytes TFs

163 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGAP009986 Anopheles gambiae AGAP009986 D 0.000
FGRRES_07914 Fusarium graminearum FGRRES_07914 D 0.000
SNOG_06363 Stagonospora nodorum SNOG_06363 I 0.000
Aqu1.225495 Amphimedon queenslandica Aqu1.225495 I 0.000
ATEG_05203 Aspergillus terreus CADATEAG00005116 I 0.000
CapteG100741 Capitella teleta CapteG100741 I 0.000
CapteG49895 Capitella teleta CapteG49895 I 0.000
CapteG88319 Capitella teleta CapteG88319 I 0.000
CCM_02544 Cordyceps militaris CCM_02544 I 0.000
CGI_10011802 Crassostrea gigas CGI_10011802 I 0.000
COCC4DRAFT_49159 Bipolaris maydis COCC4DRAFT_49159 I 0.000
COCCADRAFT_44321 Bipolaris zeicola COCCADRAFT_44321 I 0.000
COCMIDRAFT_53102 Bipolaris oryzae COCMIDRAFT_53102 I 0.000
COCSADRAFT_107886 Bipolaris sorokiniana COCSADRAFT_107886 I 0.000
COCVIDRAFT_49416 Bipolaris victoriae COCVIDRAFT_49416 I 0.000
DOTSEDRAFT_78718 Dothistroma septosporum DOTSEDRAFT_78718 I 0.000
ENSAMXG00000000335 Astyanax mexicanus ENSAMXG00000000335 I 0.000
ENSAPLG00000010674 Anas platyrhynchos ENSAPLG00000010674 I 0.000
ENSCAFG00000010422 Canis familiaris ENSCAFG00000010422 I 0.000
ENSCSAG00000011743 Chlorocebus sabaeus ENSCSAG00000011743 I 0.000
IRX3 Dasypus novemcinctus ENSDNOG00000012985 I 0.000
irx7 Gasterosteus aculeatus ENSGACG00000011160 I 0.000
ENSLOCG00000006946 Lepisosteus oculatus ENSLOCG00000006946 I 0.000
ENSMEUG00000004557 Macropus eugenii ENSMEUG00000004557 I 0.000
ENSMEUG00000014864 Macropus eugenii ENSMEUG00000014864 I 0.000
ENSMPUG00000007638 Mustela putorius furo ENSMPUG00000007638 I 0.000
ENSOANG00000029378 Ornithorhynchus anatinus ENSOANG00000029378 I 0.000
ENSOARG00000016067 Ovis aries ENSOARG00000016067 I 0.000
ENSONIG00000016567 Oreochromis niloticus ENSONIG00000016567 I 0.000
ENSONIG00000018672 Oreochromis niloticus ENSONIG00000018672 I 0.000
MKX Procavia capensis ENSPCAG00000014719 I 0.000
ENSPFOG00000006638 Poecilia formosa ENSPFOG00000006638 I 0.000
ENSPFOG00000013469 Poecilia formosa ENSPFOG00000013469 I 0.000
ENSPTRG00000039451 Pan troglodytes ENSPTRG00000039451 I 0.000
Irx3 Rattus norvegicus ENSRNOG00000011533 I 0.000
ENSSSCG00000009724 Sus scrofa ENSSSCG00000009724 I 0.000
MKX Tupaia belangeri ENSTBEG00000008150 I 0.000
ENSTNIG00000000637 Tetraodon nigroviridis ENSTNIG00000000637 I 0.000
mkxb Tetraodon nigroviridis ENSTNIG00000007881 I 0.000
mkxb Takifugu rubripes ENSTRUG00000004166 I 0.000
irx7 Takifugu rubripes ENSTRUG00000007926 I 0.000
ENSXMAG00000006967 Xiphophorus maculatus ENSXMAG00000006967 I 0.000
ENSXMAG00000012663 Xiphophorus maculatus ENSXMAG00000012663 I 0.000
FFUJ_12565 Fusarium fujikuroi FFUJ_12565 I 0.000
FGRRES_17555 Fusarium graminearum FGRRES_17555 I 0.000
FOXG_13545 Fusarium oxysporum FOXG_13545 I 0.000
HelroG138488 Helobdella robusta HelroG138488 I 0.000
HelroG153600 Helobdella robusta HelroG153600 I 0.000
HelroG171177 Helobdella robusta HelroG171177 I 0.000
HMEL002096 Heliconius melpomene HMEL002096 I 0.000
ISCW017111 Ixodes scapularis ISCW017111 I 0.000
PTT_11733 Pyrenophora teres PTT_11733 I 0.000
SETTUDRAFT_162538 Setosphaeria turcica SETTUDRAFT_162538 I 0.000
SMAR002833 Strigamia maritima SMAR002833 I 0.000
SMAR007687 Strigamia maritima SMAR007687 I 0.000
SNOG_06363 Phaeosphaeria nodorum SNOG_06363 I 0.000
Z519_11142 Cladophialophora bantiana Z519_11142 I 0.000
Aan_R015659 Calypte anna Aan_R015659 I 0.000
Afo_R009272 Aptenodytes forsteri Afo_R009272 I 0.000
Afo_R011092 Aptenodytes forsteri Afo_R011092 I 0.000
Alligator_sinensis_CCG010381.1 Alligator sinensis Alligator_sinensis_CCG010381.1 I 0.000
Brh_R000015 Buceros rhinoceros Brh_R000015 I 0.000
Brh_R010356 Buceros rhinoceros Brh_R010356 I 0.000
Gfo_R005354 Geospiza fortis Gfo_R005354 I 0.000
Gfo_R014865 Geospiza fortis Gfo_R014865 I 0.000
Myotis_brandtii_Irx1_10035798 Myotis brandtii Myotis_brandtii_Irx1_10035798 I 0.000
Ogr18478 Ophisaurus gracilis Ogr18478 I 0.000
Tal_R007088 Tyto alba Tal_R007088 I 0.000
estExt_fgenesh2_pg.C_2210037 Branchiostoma floridae estExt_fgenesh2_pg.C_2210037 I 0.000
estExt_Genewise1.C_110663 Cochliobolus heterostrophus C5 estExt_Genewise1.C_110663 I 0.000
Ocbimv22006483m.g Octopus bimaculoides Ocbimv22006483m.g I 0.000
Sjc_0052220 Schistosoma japonicum Sjc_0052220 I 0.000
irx1.L Xenopus laevis XB-GENE-865648 I 0.000
AB04741.1 Alternaria brassicicola AB04741.1 I 0.000
AARA003790 Anopheles arabiensis AARA003790 I 0.000
AMAM020176 Anopheles maculatus AMAM020176 I 0.000
A_07284 Schistosoma haematobium A_07284 I 0.000
D915_00592 Fasciola hepatica D915_00592 I 0.000
D915_04768 Fasciola hepatica D915_04768 I 0.000
D915_05481 Fasciola hepatica D915_05481 I 0.000
DILT_0000254701 Diphyllobothrium latum DILT_0000254701 I 0.000
ECPE_0000388901 Echinostoma caproni ECPE_0000388901 I 0.000
HDID_0000776001 Hymenolepis diminuta HDID_0000776001 I 0.000
HmN_000921700 Hymenolepis microstoma HmN_000921700 I 0.000
HmN_000922600 Hymenolepis microstoma HmN_000922600 I 0.000
HNAJ_0001179801 Hymenolepis nana HNAJ_0001179801 I 0.000
L596_g21727 Steinernema carpocapsae L596_g21727 I 0.000
L892_g27282 Steinernema scapterisci L892_g27282 I 0.000
L893_g31416 Steinernema glaseri L893_g31416 I 0.000
L898_g17064 Steinernema monticolum L898_g17064 I 0.000
PXEA_0002454601 Protopolystoma xenopodis PXEA_0002454601 I 0.000
SCUD_0000714801 Schistosoma curassoni SCUD_0000714801 I 0.000
SMRZ_0000148301 Schistosoma margrebowiei SMRZ_0000148301 I 0.000
SMTD_0002243001 Schistosoma mattheei SMTD_0002243001 I 0.000
SMUV_0000063001 Syphacia muris SMUV_0000063001 I 0.000
SPER_0001325101 Spirometra erinaceieuropaei SPER_0001325101 I 0.000
SSLN_0000846501 Schistocephalus solidus SSLN_0000846501 I 0.000
TASK_0000658901 Taenia asiatica TASK_0000658901 I 0.000
TsM_000760900 Taenia solium TsM_000760900 I 0.000
TTAC_0000670801 Hydatigera taeniaeformis TTAC_0000670801 I 0.000
HelroG84083 Helobdella robusta HelroG84083 N 0.000
fgenesh1_pg.C_scaffold_7000295 Sporobolomyces roseus fgenesh1_pg.C_scaffold_7000295 N 0.000
DICVIV_07073 Dictyocaulus viviparus DICVIV_07073 N 0.000
GPLIN_001377400 Globodera pallida GPLIN_001377400 N 0.000
HCOI01137300 Haemonchus contortus HCOI01137300 N 0.000
NBR_0001052001 Nippostrongylus brasiliensis NBR_0001052001 N 0.000