GLIS2 (Pan troglodytes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPTRG00000007714 T107868_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GLIS2
M02887_2.00 		Homo sapiens
KACCCCCCRCRDHG
CDHYGYGGGGGGTM		 SELEX
Jolma et al.(2013)
GLIS2_1 		0.827 1.000
GLIS2
M04449_2.00 		Homo sapiens
RCCCCCCRCRWHGH
DCDWYGYGGGGGGY		 SELEX
Yin et al.(2017)
GLIS2_eDBD_HT-SELEX 		0.827 1.000
GLIS2
M04450_2.00 		Homo sapiens
DCWHYGYDGGGGGT
ACCCCCHRCRDWGH		 SELEX
Yin et al.(2017)
GLIS2_eDBD_Methyl-HT-SELEX 		0.827 1.000
Glis2
M00129_2.00 		Mus musculus
NKACCCCYYNN
NNRRGGGGTMN		 PBM
Badis et al.(2009)
Glis2_1757 		0.827 0.986
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPTRP00000043646 C2H2 ZF 235 257
ENSPTRP00000043646 C2H2 ZF 263 287
ENSPTRP00000043646 C2H2 ZF 293 317

Links

Other C2H2 ZF family TFs
Other Pan troglodytes TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
maker-nMf.1.1.scaf00985-augustus-gene-0.14 Meloidogyne floridensis maker-nMf.1.1.scaf00985-augustus-gene-0.14 N
EVEC_0000129701 Enterobius vermicularis EVEC_0000129701 N
GPLIN_001081400 Globodera pallida GPLIN_001081400 N
HCOI00547400 Haemonchus contortus HCOI00547400 N
HPBE_0001937401 Heligmosomoides bakeri HPBE_0001937401 N
HPLM_0000813601 Haemonchus placei HPLM_0000813601 N
L596_g13814 Steinernema carpocapsae L596_g13814 N
L892_g8213 Steinernema scapterisci L892_g8213 N
L893_g25983 Steinernema glaseri L893_g25983 N
L898_g2485 Steinernema monticolum L898_g2485 N
EEL_0000409901 Elaeophora elaphi EEL_0000409901 N
maker-nMf.1.1.scaf10894-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf10894-snap-gene-0.4 N
nAv.1.0.1.g09008 Acanthocheilonema viteae nAv.1.0.1.g09008 N
NBR_0001082401 Nippostrongylus brasiliensis NBR_0001082401 N
nDi.2.2.2.g08480 Dirofilaria immitis nDi.2.2.2.g08480 N
NECAME_10287 Necator americanus NECAME_10287 N
nOo.2.0.1.g01489 Onchocerca ochengi nOo.2.0.1.g01489 N
OFLC_0000444401 Onchocerca flexuosa OFLC_0000444401 N
SMUV_0001029601 Syphacia muris SMUV_0001029601 N
TCLT_0000789301 Thelazia callipaeda TCLT_0000789301 N
ACOC_0000207501 Angiostrongylus costaricensis ACOC_0000207501 N
Bm4662 Brugia malayi Bm4662 N
CBG03666 Caenorhabditis briggsae CBG03666 N
CBN12315 Caenorhabditis brenneri CBN12315 N
CBN13279 Caenorhabditis brenneri CBN13279 N
CJA06746 Caenorhabditis japonica CJA06746 N
CRE25006 Caenorhabditis remanei CRE25006 N
LOAG_01771 Loa loa LOAG_01771 N
madf-3 Caenorhabditis elegans WBGene00019218 N
WBGene00248256 Onchocerca volvulus WBGene00248256 N
WUBG_08209 Wuchereria bancrofti WUBG_08209 N
ALUE_0000346601 Ascaris lumbricoides ALUE_0000346601 N
ANCCAN_12036 Ancylostoma caninum ANCCAN_12036 N
ANCCEY_05568 Ancylostoma ceylanicum ANCCEY_05568 N
ASIM_0001065301 Anisakis simplex ASIM_0001065301 N
ASU_05114 Ascaris suum ASU_05114 N
BTMF_0001501001 Brugia timori BTMF_0001501001 N
DICVIV_05986 Dictyocaulus viviparus DICVIV_05986 N
DME_0000085501 Dracunculus medinensis DME_0000085501 N