CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Repin1
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000008239
T108938_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000011032
C2H2 ZF
109
130
HRCAHCRKRFPGWVALWLHTRR
ENSRNOP00000011032
C2H2 ZF
137
159
LPCHECNQRFRHAPFLALHLQVH
ENSRNOP00000011032
C2H2 ZF
168
190
FICHLCGHSFRGWVALVLHLRAH
ENSRNOP00000011032
C2H2 ZF
197
218
ITCPECNKRFWRQKQLRAHLRR
ENSRNOP00000011032
C2H2 ZF
229
251
FICGNCGRSFAQWDQLVVHKRVH
ENSRNOP00000011032
C2H2 ZF
288
310
FQCACCGKRFRHKPNLIAHRRVH
ENSRNOP00000011032
C2H2 ZF
316
338
HQCPECGKRFTNKPYLTSHRRIH
ENSRNOP00000011032
C2H2 ZF
344
366
YPCTECGRRFRHKPNLLSHSKIH
ENSRNOP00000011032
C2H2 ZF
412
434
HSCTDCGRSFRLERFLRLHQRQH
ENSRNOP00000011032
C2H2 ZF
440
462
FTCTECGKNFGKKTHLVAHSRVH
ENSRNOP00000011032
C2H2 ZF
468
490
FACEECGRRFSQGSHLAAHRRDH
ENSRNOP00000011032
C2H2 ZF
496
518
FVCPDCGKAFRHKPYLAAHRRIH
ENSRNOP00000011032
C2H2 ZF
524
546
YVCPDCGKAFSQKSNLVSHRRIH
ENSRNOP00000011032
C2H2 ZF
552
574
YACPDCDRSFSQKSNLITHRKSH
ENSRNOP00000011032
C2H2 ZF
580
602
FCCAICGQTFDDEDRLLMHQKKH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
REPIN1
Callithrix jacchus
ENSCJAG00000010483
N
0.765
ENSCSAG00000006882
Chlorocebus sabaeus
ENSCSAG00000006882
N
0.766
REPIN1
Dasypus novemcinctus
ENSDNOG00000032100
N
0.759
REPIN1
Felis catus
ENSFCAG00000023343
N
0.756
REPIN1
Homo sapiens
ENSG00000214022
N
0.770
REPIN1
Macaca mulatta
ENSMMUG00000022633
N
0.766
Repin1
Mus musculus
ENSMUSG00000052751
N
0.823
ENSNLEG00000003811
Nomascus leucogenys
ENSNLEG00000003811
N
0.769
REPIN1
Oryctolagus cuniculus
ENSOCUG00000004883
N
0.780
REPIN1
Otolemur garnettii
ENSOGAG00000030454
N
0.766
ENSPANG00000019896
Papio anubis
ENSPANG00000019896
N
0.766
ENSPPYG00000018167
Pongo abelii
ENSPPYG00000018167
N
0.770
REPIN1
Pan troglodytes
ENSPTRG00000033818
N
0.770