Zscan26 (Rattus norvegicus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSRNOG00000053518 T109325_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Zscan26
M00131_2.00 		Mus musculus
MYTWGTHC
GDACWARK		 PBM
Badis et al.(2009)
Zfp187_2626 		0.827 0.994
ZSCAN26
M10313_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SREZBP_01 		0.773 0.906
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000073520 C2H2 ZF 269 291
ENSRNOP00000073520 C2H2 ZF 297 319
ENSRNOP00000073520 C2H2 ZF 325 347
ENSRNOP00000073520 C2H2 ZF 354 375
ENSRNOP00000073520 C2H2 ZF 381 403
ENSRNOP00000073520 C2H2 ZF 409 431
ENSRNOP00000073520 C2H2 ZF 437 460
ENSRNOP00000074883 C2H2 ZF 269 291
ENSRNOP00000074883 C2H2 ZF 297 319
ENSRNOP00000074883 C2H2 ZF 325 347
ENSRNOP00000074883 C2H2 ZF 354 375
ENSRNOP00000074883 C2H2 ZF 381 403
ENSRNOP00000074883 C2H2 ZF 409 431
ENSRNOP00000074883 C2H2 ZF 437 460

Links

Other C2H2 ZF family TFs
Other Rattus norvegicus TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000155004 Malus domestica MDP0000155004 N
Aquca_002_01079 Aquilegia coerulea Aquca_002_01079 N
Bostr.7128s0463 Boechera stricta Bostr.7128s0463 N
Cagra.0909s0036 Capsella grandiflora Cagra.0909s0036 N
Carubv10008481m.g Capsella rubella Carubv10008481m.g N
Ciclev10019100m.g Citrus clementina Ciclev10019100m.g N
Eucgr.B00689 Eucalyptus grandis Eucgr.B00689 N
gene26197-v1.0-hybrid Fragaria vesca gene26197-v1.0-hybrid N
Gorai.007G008000 Gossypium raimondii Gorai.007G008000 N
Cucsa.090680 Cucumis sativus Cucsa.090680 N
MDP0000637083 Malus domestica MDP0000637083 N
orange1.1g008805m.g Citrus sinensis orange1.1g008805m.g N
SapurV1A.0851s0040 Salix purpurea SapurV1A.0851s0040 N
SapurV1A.3382s0020 Salix purpurea SapurV1A.3382s0020 N
PK14806.1 Cannabis sativa PK14806.1 N
LjSGA_062426.1 Lotus japonicus LjSGA_062426.1 N
PDK_20s1489551g002 Phoenix dactylifera PDK_20s1489551g002 N
AMTR_s00024p00250640 Amborella trichopoda AMTR_s00024p00250640 N
cassava37500.valid.m1 Manihot esculenta cassava37500.valid.m1 N
cassava37499.valid.m1 Manihot esculenta cassava37499.valid.m1 N
cassava37498.valid.m1 Manihot esculenta cassava37498.valid.m1 N
Pm030213 Prunus mume Pm030213 N
VIT_17s0000g04250 Vitis vinifera VIT_17s0000g04250 N
TCM_012243 Theobroma cacao TCM_012243 N
Solyc03g119830.2 Solanum lycopersicum Solyc03g119830.2 N
PRUPE_ppa002398mg Prunus persica PRUPE_ppa002398mg N
POPTR_0012s05580 Populus trichocarpa POPTR_0012s05580 N
PGSC0003DMG400005619 Solanum tuberosum PGSC0003DMG400005619 N
GLYMA17G13141 Glycine max GLYMA17G13141 N
GLYMA05G07875 Glycine max GLYMA05G07875 N
Bo8g104310 Brassica oleracea Bo8g104310 N
Bo5g083750 Brassica oleracea Bo5g083750 N
AT1G18560 Arabidopsis thaliana AT1G18560 N