CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ZNF184
(
Sus scrofa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSSCG00000001164
T110163_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF184
M08285_2.00
Homo sapiens
TCYTCWCCA
TGGWGARGA
ChIP-seq
Schmitges et al.(2016)
Q99676_4-6.RCADE
0.823
0.991
ZNF184
M07571_2.00
Homo sapiens
NNNNNBNNNNNNAYKCNHCTTTCYMDB
VHKRGAAAGDNGMRTNNNNNNVNNNNN
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF184.RCADE.ReprocessedData
0.823
0.991
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000001233
C2H2 ZF
207
229
CKCNECGKAFSYCSALIRHQRTH
ENSSSCP00000001233
C2H2 ZF
235
257
YKCNECEKAFSRSENLINHQRIH
ENSSSCP00000001233
C2H2 ZF
263
285
YKCDQCGKGFIEGPSLTQHQRIH
ENSSSCP00000001233
C2H2 ZF
291
313
YKCDECGKAFSQRTHLVQHQRIH
ENSSSCP00000001233
C2H2 ZF
319
341
YTCNECGKAFSQRGHFMEHQKIH
ENSSSCP00000001233
C2H2 ZF
347
369
FKCDECDKTFTRSTHLTQHQKIH
ENSSSCP00000001233
C2H2 ZF
375
397
YKCNECGKAFNGPSTFIRHHMIH
ENSSSCP00000001233
C2H2 ZF
403
425
YECNECGKAFSQHSNLTQHQKTH
ENSSSCP00000001233
C2H2 ZF
431
453
YDCAECGKSFSYWSSLAQHLKIH
ENSSSCP00000001233
C2H2 ZF
459
481
YKCNECGKAFSYCSSLTQHRRIH
ENSSSCP00000001233
C2H2 ZF
487
509
FECSECGKAFSYLSNLNQHQKTH
ENSSSCP00000001233
C2H2 ZF
515
537
YECKECGKAFIRSSSLAKHERIH
ENSSSCP00000001233
C2H2 ZF
543
565
YQCHECGKTFSYGSSLIQHRKIH
ENSSSCP00000001233
C2H2 ZF
571
593
YKCNECGRAFNQNIHLTQHKRIH
ENSSSCP00000001233
C2H2 ZF
599
621
YECAECGKAFRHCSSLAQHQKTH
ENSSSCP00000001233
C2H2 ZF
627
649
YQCNKCEKAFSQSSHLAQHQRIH
ENSSSCP00000001233
C2H2 ZF
655
677
YKCNECDKAFSRSTHLTEHQNTH
ENSSSCP00000001233
C2H2 ZF
683
705
YNCNECRKTFSQSTYLIQHQRIH
ENSSSCP00000001233
C2H2 ZF
711
733
FGCNDCGKAFRYRSALSKHQRLH
Links
Other
C2H2 ZF
family TFs
Other
Sus scrofa
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action