ENSSTOG00000020366 (Ictidomys tridecemlineatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSSTOG00000020366 T110819_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Gli1
M01023_2.00 		Mus musculus
NGACCACCHN
NDGGTGGTCN		 PBM
Peterson et al.(2012)
Gli1 		0.827 1.000
GLI1
M02643_2.00 		Homo sapiens
GACCACCCAMG
CKTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI1 		0.827 1.000
Gli1
M08976_2.00 		Mus musculus
RGRCCACCCASV
BSTGGGTGGYCY		 Misc
Kulakovskiy et al.(2013)
GLI1_MOUSE.H11MO.0.C 		0.827 1.000
GLI1
M10176_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q2 		0.827 1.000
GLI1
M10177_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q3_01 		0.827 1.000
GLI1
M10178_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI1_Q3 		0.827 1.000
GLI1
M10179_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI_Q6 		0.827 1.000
GLI3
M04416_2.00 		Homo sapiens
VGACCACCCACVNHG
CDNBGTGGGTGGTCB		 SELEX
Yin et al.(2017)
GLI3_eDBD_HT-SELEX 		0.796 0.886
GLI3
M02642_2.00 		Homo sapiens
GACCACCCANK
MNTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI3 		0.796 0.886
GLI3
M08875_2.00 		Homo sapiens
VRACCACCCAV
BTGGGTGGTYB		 Misc
Kulakovskiy et al.(2013)
GLI3_HUMAN.H11MO.0.B 		0.796 0.886
GLI3
M10167_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI3_01 		0.796 0.886
GLI3
M10168_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI3_Q5_01 		0.796 0.886
GLI3
M04417_2.00 		Homo sapiens
CWHBGTGGGTGGTCY
RGACCACCCACVDWG		 SELEX
Yin et al.(2017)
GLI3_eDBD_Methyl-HT-SELEX 		0.796 0.886
Gli2
M01024_2.00 		Mus musculus
NGACCACCYN
NRGGTGGTCN		 PBM
Peterson et al.(2012)
Gli2 		0.779 0.851
GLI2
M02875_2.00 		Homo sapiens
GMCCACMCANVNHB
VDNBNTGKGTGGKC		 SELEX
Jolma et al.(2013)
GLI2_1 		0.779 0.851
GLI2
M02876_2.00 		Homo sapiens
GCGACCACVCWR
YWGBGTGGTCGC		 SELEX
Jolma et al.(2013)
GLI2_2 		0.779 0.851
GLI2
M02732_2.00 		Homo sapiens
GACCACMCAN
NTGKGTGGTC		 SELEX
Jolma et al.(2010)
GLI2_monomer 		0.779 0.851
GLI2
M04402_2.00 		Homo sapiens
VGACCACCCACVDHG
CDHBGTGGGTGGTCB		 SELEX
Yin et al.(2017)
GLI2_eDBD_HT-SELEX 		0.779 0.851
GLI2
M02641_2.00 		Homo sapiens
GACCACCCAHG
CDTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI2 		0.779 0.851
GLI2
M10114_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI2_Q3 		0.779 0.851
GLI2
M10115_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI2_Q6 		0.779 0.851
GLI2
M04403_2.00 		Homo sapiens
RGACCACCCACVWWG
CWWBGTGGGTGGTCY		 SELEX
Yin et al.(2017)
GLI2_eDBD_Methyl-HT-SELEX 		0.779 0.851
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSTOP00000019795 C2H2 ZF 235 259
ENSSTOP00000019795 C2H2 ZF 267 294
ENSSTOP00000019795 C2H2 ZF 300 324
ENSSTOP00000019795 C2H2 ZF 330 355
ENSSTOP00000019795 C2H2 ZF 361 386

Links

Other C2H2 ZF family TFs
Other Ictidomys tridecemlineatus TFs

163 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ERF094 Arabidopsis thaliana AT1G06160 D 0.000
AC233933.1_FG001 Zea mays AC233933.1_FG001 I 0.000
AMTR_s00009p00143340 Amborella trichopoda AMTR_s00009p00143340 I 0.000
BGIOSGA024428 Oryza indica BGIOSGA024428 I 0.000
BGIOSGA024429 Oryza indica BGIOSGA024429 I 0.000
BGIOSGA031313 Oryza indica BGIOSGA031313 I 0.000
Bo5g007280 Brassica oleracea Bo5g007280 I 0.000
Bo8g114710 Brassica oleracea Bo8g114710 I 0.000
Bra015478 Brassica rapa Bra015478 I 0.000
Bra032433 Brassica rapa Bra032433 I 0.000
BRADI4G38930 Brachypodium distachyon BRADI4G38930 I 0.000
F775_22020 Aegilops tauschii F775_22020 I 0.000
F775_22331 Aegilops tauschii F775_22331 I 0.000
F775_52314 Aegilops tauschii F775_52314 I 0.000
GLYMA02G00870 Glycine max GLYMA02G00870 I 0.000
GLYMA03G31940 Glycine max GLYMA03G31940 I 0.000
GLYMA10G00980 Glycine max GLYMA10G00980 I 0.000
GLYMA10G04170 Glycine max GLYMA10G04170 I 0.000
GLYMA10G33060 Glycine max GLYMA10G33060 I 0.000
GLYMA13G18350 Glycine max GLYMA13G18350 I 0.000
GLYMA13G18370 Glycine max GLYMA13G18370 I 0.000
GLYMA13G18390 Glycine max GLYMA13G18390 I 0.000
GLYMA19G34670 Glycine max GLYMA19G34670 I 0.000
GLYMA19G34696 Glycine max GLYMA19G34696 I 0.000
GLYMA20G34570 Glycine max GLYMA20G34570 I 0.000
GRMZM2G073258 Zea mays GRMZM2G073258 I 0.000
GRMZM2G123119 Zea mays GRMZM2G123119 I 0.000
GRMZM2G379652 Zea mays GRMZM2G379652 I 0.000
GRMZM2G478965 Zea mays GRMZM2G478965 I 0.000
GRMZM5G837876 Zea mays GRMZM5G837876 I 0.000
GSMUA_Achr11G22020_001 Musa acuminata GSMUA_Achr11G22020_001 I 0.000
GSMUA_Achr1G01380_001 Musa acuminata GSMUA_Achr1G01380_001 I 0.000
GSMUA_Achr3G15550_001 Musa acuminata GSMUA_Achr3G15550_001 I 0.000
GSMUA_Achr4G05520_001 Musa acuminata GSMUA_Achr4G05520_001 I 0.000
GSMUA_Achr4G12060_001 Musa acuminata GSMUA_Achr4G12060_001 I 0.000
GSMUA_Achr5G19610_001 Musa acuminata GSMUA_Achr5G19610_001 I 0.000
GSMUA_AchrUn_randomG10760_001 Musa acuminata GSMUA_AchrUn_randomG10760_001 I 0.000
LPERR07G06830 Leersia perrieri LPERR07G06830 I 0.000
LPERR09G16380 Leersia perrieri LPERR09G16380 I 0.000
MLOC_43207 Hordeum vulgare MLOC_43207 I 0.000
MLOC_77420 Hordeum vulgare MLOC_77420 I 0.000
MTR_1g043350 Medicago truncatula MTR_1g043350 I 0.000
MTR_1g069940 Medicago truncatula MTR_1g069940 I 0.000
MTR_4g054360 Medicago truncatula MTR_4g054360 I 0.000
MTR_4g054860 Medicago truncatula MTR_4g054860 I 0.000
MTR_7g096780 Medicago truncatula MTR_7g096780 I 0.000
MTR_7g096830 Medicago truncatula MTR_7g096830 I 0.000
OB09G27130 Oryza brachyantha OB09G27130 I 0.000
OBART07G11330 Oryza barthii OBART07G11330 I 0.000
OBART07G11340 Oryza barthii OBART07G11340 I 0.000
OBART09G20410 Oryza barthii OBART09G20410 I 0.000
OGLUM07G10870 Oryza glumaepatula OGLUM07G10870 I 0.000
OGLUM07G10880 Oryza glumaepatula OGLUM07G10880 I 0.000
OGLUM09G21150 Oryza glumaepatula OGLUM09G21150 I 0.000
OLONG_005597 Oryza longistaminata OLONG_005597 I 0.000
ONIVA01G50300 Oryza nivara ONIVA01G50300 I 0.000
ONIVA07G09500 Oryza nivara ONIVA07G09500 I 0.000
ONIVA09G20840 Oryza nivara ONIVA09G20840 I 0.000
OPUNC07G10310 Oryza punctata OPUNC07G10310 I 0.000
OPUNC09G18690 Oryza punctata OPUNC09G18690 I 0.000
ORGLA07G0097000 Oryza glaberrima ORGLA07G0097000 I 0.000
ORGLA07G0097100 Oryza glaberrima ORGLA07G0097100 I 0.000
ORUFI07G11580 Oryza rufipogon ORUFI07G11580 I 0.000
ORUFI07G11590 Oryza rufipogon ORUFI07G11590 I 0.000
ORUFI09G22040 Oryza rufipogon ORUFI09G22040 I 0.000
OS07G0410700 Oryza sativa OS07G0410700 I 0.000
OS09G0572000 Oryza sativa OS09G0572000 I 0.000
POPTR_0008s16610 Populus trichocarpa POPTR_0008s16610 I 0.000
POPTR_0011s06010 Populus trichocarpa POPTR_0011s06010 I 0.000
POPTR_0013s04240 Populus trichocarpa POPTR_0013s04240 I 0.000
POPTR_0019s03170 Populus trichocarpa POPTR_0019s03170 I 0.000
POPTR_0102s00200 Populus trichocarpa POPTR_0102s00200 I 0.000
PRUPE_ppa023839mg Prunus persica PRUPE_ppa023839mg I 0.000
PRUPE_ppa024173mg Prunus persica PRUPE_ppa024173mg I 0.000
Sb01g000352 Sorghum bicolor Sb01g000352 I 0.000
Sb02g005810 Sorghum bicolor Sb02g005810 I 0.000
Sb02g005840 Sorghum bicolor Sb02g005840 I 0.000
Sb02g012630 Sorghum bicolor Sb02g012630 I 0.000
Si027485m.g Setaria italica Si027485m.g I 0.000
Si028088m.g Setaria italica Si028088m.g I 0.000
Si028135m.g Setaria italica Si028135m.g I 0.000
Si028219m.g Setaria italica Si028219m.g I 0.000
Si031946m.g Setaria italica Si031946m.g I 0.000
Si032815m.g Setaria italica Si032815m.g I 0.000
Si033089m.g Setaria italica Si033089m.g I 0.000
Si038911m.g Setaria italica Si038911m.g I 0.000
TCM_004052 Theobroma cacao TCM_004052 I 0.000
TCM_020871 Theobroma cacao TCM_020871 I 0.000
Traes_2BS_0EE99D4A6 Triticum aestivum Traes_2BS_0EE99D4A6 I 0.000
Traes_4AL_1A0E673DC Triticum aestivum Traes_4AL_1A0E673DC I 0.000
Traes_4AL_5E86DF14B Triticum aestivum Traes_4AL_5E86DF14B I 0.000
Traes_4AS_9450AD3F4 Triticum aestivum Traes_4AS_9450AD3F4 I 0.000
Traes_4BL_39AE2989D Triticum aestivum Traes_4BL_39AE2989D I 0.000
Traes_4DL_CB92B5ABB Triticum aestivum Traes_4DL_CB92B5ABB I 0.000
Traes_4DS_9C01B536B Triticum aestivum Traes_4DS_9C01B536B I 0.000
Traes_5BL_4E044468C Triticum aestivum Traes_5BL_4E044468C I 0.000
Traes_5DL_53D8DF9CD Triticum aestivum Traes_5DL_53D8DF9CD I 0.000
TRIUR3_16508 Triticum urartu TRIUR3_16508 I 0.000
TRIUR3_29784 Triticum urartu TRIUR3_29784 I 0.000
VIT_05s0049g00510 Vitis vinifera VIT_05s0049g00510 I 0.000
VIT_07s0005g03230 Vitis vinifera VIT_07s0005g03230 I 0.000
VIT_07s0005g03260 Vitis vinifera VIT_07s0005g03260 I 0.000
VIT_07s0005g03270 Vitis vinifera VIT_07s0005g03270 I 0.000
VIT_14s0081g00730 Vitis vinifera VIT_14s0081g00730 I 0.000
Ca_12219 Cicer arietinum Ca_12219 I 0.000
Ca_12221 Cicer arietinum Ca_12221 I 0.000
Ca_23170 Cicer arietinum Ca_23170 I 0.000
Cla006080 Citrullus lanatus Cla006080 I 0.000
Cla007697 Citrullus lanatus Cla007697 I 0.000
Cla015066 Citrullus lanatus Cla015066 I 0.000
Cla021850 Citrullus lanatus Cla021850 I 0.000
Pm009382 Prunus mume Pm009382 I 0.000
Pm020604 Prunus mume Pm020604 I 0.000
29680.m001678 Ricinus communis 29680.m001678 I 0.000
29895.m000321 Ricinus communis 29895.m000321 I 0.000
29900.m001561 Ricinus communis 29900.m001561 I 0.000
cassava38509.m1 Manihot esculenta cassava38509.m1 I 0.000
cassava632.valid.m1 Manihot esculenta cassava632.valid.m1 I 0.000
Cucsa.053560 Cucumis sativus Cucsa.053560 I 0.000
Cucsa.255340 Cucumis sativus Cucsa.255340 I 0.000
Cucsa.388530 Cucumis sativus Cucsa.388530 I 0.000
mgf018693m Mimulus guttatus mgf018693m I 0.000
mgf020623m Mimulus guttatus mgf020623m I 0.000
mgf021081m Mimulus guttatus mgf021081m I 0.000
mgf022372m Mimulus guttatus mgf022372m I 0.000
mgf023779m Mimulus guttatus mgf023779m I 0.000
Aquca_017_00711 Aquilegia coerulea Aquca_017_00711 I 0.000
Aquca_034_00376 Aquilegia coerulea Aquca_034_00376 I 0.000
Bostr.25219s0341 Boechera stricta Bostr.25219s0341 I 0.000
Cagra.1671s0247 Capsella grandiflora Cagra.1671s0247 I 0.000
Carubv10010105m.g Capsella rubella Carubv10010105m.g I 0.000
Ciclev10005820m.g Citrus clementina Ciclev10005820m.g I 0.000
Ciclev10024142m.g Citrus clementina Ciclev10024142m.g I 0.000
Eucgr.H03088 Eucalyptus grandis Eucgr.H03088 I 0.000
Eucgr.K03266 Eucalyptus grandis Eucgr.K03266 I 0.000
evm.TU.supercontig_162.25 Carica papaya evm.TU.supercontig_162.25 I 0.000
evm.TU.supercontig_44.71 Carica papaya evm.TU.supercontig_44.71 I 0.000
gene08077-v1.0-hybrid Fragaria vesca gene08077-v1.0-hybrid I 0.000
gene11442-v1.0-hybrid Fragaria vesca gene11442-v1.0-hybrid I 0.000
Gorai.001G176800 Gossypium raimondii Gorai.001G176800 I 0.000
Gorai.001G252600 Gossypium raimondii Gorai.001G252600 I 0.000
Gorai.001G253000 Gossypium raimondii Gorai.001G253000 I 0.000
Gorai.010G156600 Gossypium raimondii Gorai.010G156600 I 0.000
Gorai.011G173000 Gossypium raimondii Gorai.011G173000 I 0.000
Gorai.013G186800 Gossypium raimondii Gorai.013G186800 I 0.000
Lus10011829.g Linum usitatissimum Lus10011829.g I 0.000
Lus10021193.g Linum usitatissimum Lus10021193.g I 0.000
Lus10022015.g Linum usitatissimum Lus10022015.g I 0.000
Lus10022935.g Linum usitatissimum Lus10022935.g I 0.000
Lus10042557.g Linum usitatissimum Lus10042557.g I 0.000
MDP0000127134 Malus domestica MDP0000127134 I 0.000
MDP0000167207 Malus domestica MDP0000167207 I 0.000
MDP0000235313 Malus domestica MDP0000235313 I 0.000
MDP0000855671 Malus domestica MDP0000855671 I 0.000
orange1.1g039409m.g Citrus sinensis orange1.1g039409m.g I 0.000
orange1.1g047387m.g Citrus sinensis orange1.1g047387m.g I 0.000
Pavir.Ba02374 Panicum virgatum Pavir.Ba02374 I 0.000
Pavir.Ba02781 Panicum virgatum Pavir.Ba02781 I 0.000
Pavir.Ba03491 Panicum virgatum Pavir.Ba03491 I 0.000
Pavir.Bb00652 Panicum virgatum Pavir.Bb00652 I 0.000
Pavir.Bb00653 Panicum virgatum Pavir.Bb00653 I 0.000
Pavir.Bb00962 Panicum virgatum Pavir.Bb00962 I 0.000
Pavir.Ha00304 Panicum virgatum Pavir.Ha00304 I 0.000
Pavir.Ha00307 Panicum virgatum Pavir.Ha00307 I 0.000
Pavir.Ha01200 Panicum virgatum Pavir.Ha01200 I 0.000
Pavir.Ha01264 Panicum virgatum Pavir.Ha01264 I 0.000
Pavir.Hb01074 Panicum virgatum Pavir.Hb01074 I 0.000
Pavir.Hb01336 Panicum virgatum Pavir.Hb01336 I 0.000
Pavir.Ia00066 Panicum virgatum Pavir.Ia00066 I 0.000
Pavir.Ib03413 Panicum virgatum Pavir.Ib03413 I 0.000
Pavir.J01078 Panicum virgatum Pavir.J01078 I 0.000
Pavir.J02630 Panicum virgatum Pavir.J02630 I 0.000
Pavir.J16149 Panicum virgatum Pavir.J16149 I 0.000
Pavir.J17768 Panicum virgatum Pavir.J17768 I 0.000
Pavir.J28684 Panicum virgatum Pavir.J28684 I 0.000
Pavir.J30299 Panicum virgatum Pavir.J30299 I 0.000
Pavir.J37124 Panicum virgatum Pavir.J37124 I 0.000
SapurV1A.0021s0980 Salix purpurea SapurV1A.0021s0980 I 0.000
SapurV1A.0132s0310 Salix purpurea SapurV1A.0132s0310 I 0.000
SapurV1A.0270s0240 Salix purpurea SapurV1A.0270s0240 I 0.000
Thhalv10008518m.g Eutrema salsugineum Thhalv10008518m.g I 0.000
chr1.CM0295.160.nd Lotus japonicus chr1.CM0295.160.nd I 0.000
chr6.CM1613.110.nc Lotus japonicus chr6.CM1613.110.nc I 0.000
F775_01237 Aegilops tauschii F775_01237 N 0.000
F775_22648 Aegilops tauschii F775_22648 N 0.000
Traes_2AL_9E90C2488 Triticum aestivum Traes_2AL_9E90C2488 N 0.000
Traes_2BL_304012B04 Triticum aestivum Traes_2BL_304012B04 N 0.000
Traes_2BL_3A3353970 Triticum aestivum Traes_2BL_3A3353970 N 0.000
Pavir.Ga02734 Panicum virgatum Pavir.Ga02734 N 0.000