ENSSTOG00000022550 (Ictidomys tridecemlineatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSSTOG00000022550 T110873_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZFP41
M04597_2.00 		Homo sapiens
NGCTAACTCTCCRYN
NRYGGAGAGTTAGCN		 SELEX
Yin et al.(2017)
ZFP41_FL_HT-SELEX 		0.814 0.935
ZFP41
M04598_2.00 		Homo sapiens
BGCTAACTCTCCRCN
NGYGGAGAGTTAGCV		 SELEX
Yin et al.(2017)
ZFP41_FL_Methyl-HT-SELEX 		0.814 0.935
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSTOP00000023875 C2H2 ZF 87 109
ENSSTOP00000023875 C2H2 ZF 115 137
ENSSTOP00000023875 C2H2 ZF 143 165
ENSSTOP00000023875 C2H2 ZF 171 193

Links

Other C2H2 ZF family TFs
Other Ictidomys tridecemlineatus TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT5G22990 Arabidopsis thaliana AT5G22990 D
AT2G15740 Arabidopsis thaliana AT2G15740 D
Cagra.0604s0001 Capsella grandiflora Cagra.0604s0001 I
Thhalv10023174m.g Eutrema salsugineum Thhalv10023174m.g I
Thhalv10015522m.g Eutrema salsugineum Thhalv10015522m.g I
Carubv10027554m.g Capsella rubella Carubv10027554m.g I
Carubv10025077m.g Capsella rubella Carubv10025077m.g I
Carubv10016477m.g Capsella rubella Carubv10016477m.g I
Carubv10015875m.g Capsella rubella Carubv10015875m.g I
Carubv10015674m.g Capsella rubella Carubv10015674m.g I
Carubv10002800m.g Capsella rubella Carubv10002800m.g I
Cagra.6034s0007 Capsella grandiflora Cagra.6034s0007 I
Cagra.3954s0034 Capsella grandiflora Cagra.3954s0034 I
Cagra.2968s0004 Capsella grandiflora Cagra.2968s0004 I
Bostr.18351s0050 Boechera stricta Bostr.18351s0050 I
Bostr.10199s0147 Boechera stricta Bostr.10199s0147 I
scaffold_602360.1 Arabidopsis lyrata scaffold_602360.1 I
scaffold_303767.1 Arabidopsis lyrata scaffold_303767.1 I
Bra039606 Brassica rapa Bra039606 I
Bo9g147060 Brassica oleracea Bo9g147060 I
Bo7g010020 Brassica oleracea Bo7g010020 I
AT5G42640 Arabidopsis thaliana AT5G42640 I
AT2G18490 Arabidopsis thaliana AT2G18490 I