CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ENSXMAG00000005013 *(Xiphophorus maculatus)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00096 (zf-C2H2)	IPR007087	ENSXMAG00000005013	T113776_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
GLIS3 M02880_2.00	Homo sapiens	CTTYGTGGGGGGTM	KACCCCCCACRAAG	SELEX Jolma et al.(2013) GLIS3_1	0.798	0.904
GLIS3 M10169_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ZNF515_01	0.798	0.904
GLIS3 M10170_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ZNF515_Q6_01	0.798	0.904
GLIS3 M10171_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$ZNF515_Q6	0.798	0.904
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSXMAP00000005012	C2H2 ZF	493	518	HCCRWLDCTAVYDQKEELVRHIEKLH
ENSXMAP00000005012	C2H2 ZF	527	554	FTCYWVGCPRNFKPFNARYKLLIHMRVH
ENSXMAP00000005012	C2H2 ZF	561	584	KCSFEGCNKAFSRLENLKIHLRSH
ENSXMAP00000005012	C2H2 ZF	590	614	YMCQHPGCHKAFSNSSDRAKHQRTH
ENSXMAP00000005012	C2H2 ZF	620	644	YACQVPGCAKRYTDPSSLRKHMKSH

Links
Other C2H2 ZF family TFs
Other *Xiphophorus maculatus* TFs