CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSXMAG00000013848
(
Xiphophorus maculatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSXMAG00000013848
T113935_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSXMAP00000013876
C2H2 ZF
189
216
YCCQWEGCARNGRGFNARYKMLIHIRTH
ENSXMAP00000013876
C2H2 ZF
222
244
HHCPTCNKSFSRLENLKIHTRSH
ENSXMAP00000013876
C2H2 ZF
250
274
YICPYEGCNKRYSNSSDRFKHTRTH
ENSXMAP00000013876
C2H2 ZF
280
304
YCCKMAGCLKRYTDPSSLRKHIKAH
Links
Other
C2H2 ZF
family TFs
Other
Xiphophorus maculatus
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava35156.m1
Manihot esculenta
cassava35156.m1
N
LjSGA_089351.1
Lotus japonicus
LjSGA_089351.1
N
SapurV1A.0161s0030
Salix purpurea
SapurV1A.0161s0030
N
MDP0000216231
Malus domestica
MDP0000216231
N
MDP0000153290
Malus domestica
MDP0000153290
N
Gorai.007G034800
Gossypium raimondii
Gorai.007G034800
N
Gorai.003G070700
Gossypium raimondii
Gorai.003G070700
N
gene09561-v1.0-hybrid
Fragaria vesca
gene09561-v1.0-hybrid
N
evm.TU.supercontig_17.185
Carica papaya
evm.TU.supercontig_17.185
N
Ciclev10021399m.g
Citrus clementina
Ciclev10021399m.g
N
GSMUA_Achr5G15570_001
Musa acuminata
GSMUA_Achr5G15570_001
N
cassava19740.m1
Manihot esculenta
cassava19740.m1
N
30147.m014053
Ricinus communis
30147.m014053
N
Pm024623
Prunus mume
Pm024623
N
Ca_15323
Cicer arietinum
Ca_15323
N
TCM_030184
Theobroma cacao
TCM_030184
N
Solyc03g113360.2
Solanum lycopersicum
Solyc03g113360.2
N
POPTR_0015s07780
Populus trichocarpa
POPTR_0015s07780
N
PGSC0003DMG400013182
Solanum tuberosum
PGSC0003DMG400013182
N
MTR_4g107450
Medicago truncatula
MTR_4g107450
N