CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GF14525
(
Drosophila ananassae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0091552
T114840_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
wor
M03664_2.00
Drosophila melanogaster
GYRACAGGTGYAH
DTRCACCTGTYRC
SELEX
Nitta et al.(2015)
wor_1
0.827
1.000
wor
M03665_2.00
Drosophila melanogaster
DTRCACCTGTYGY
RCRACAGGTGYAH
SELEX
Nitta et al.(2015)
wor_2
0.827
1.000
wor
M06051_2.00
Drosophila melanogaster
CACCTGY
RCAGGTG
B1H
Zhu et al.(2011)
wor_SANGER_2.5_FBgn0001983
0.827
1.000
wor
M06052_2.00
Drosophila melanogaster
VCACCTGY
RCAGGTGB
B1H
Zhu et al.(2011)
wor_SOLEXA_2.5_FBgn0001983
0.827
1.000
esg
M06050_2.00
Drosophila melanogaster
CACCTGH
DCAGGTG
B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981
0.769
0.842
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0117717
C2H2 ZF
340
362
YHCQDCGKSYSTYSGLSKHQQFH
FBpp0117717
C2H2 ZF
375
397
FSCKNCDKTYVSLGALKMHIRTH
FBpp0117717
C2H2 ZF
401
423
CKCPICGKAFSRPWLLQGHIRTH
FBpp0117717
C2H2 ZF
429
451
FSCQHCNRAFADRSNLRAHMQTH
FBpp0117717
C2H2 ZF
457
478
YSCPTCTKSFSRMSLLAKHLQS
Links
Other
C2H2 ZF
family TFs
Other
Drosophila ananassae
TFs
59 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VIT_16s0050g02440
Vitis vinifera
VIT_16s0050g02440
N
PDK_20s1555001g001
Phoenix dactylifera
PDK_20s1555001g001
N
PK04121.1
Cannabis sativa
PK04121.1
N
Pavir.Eb00173
Panicum virgatum
Pavir.Eb00173
N
Pavir.Ea00125
Panicum virgatum
Pavir.Ea00125
N
MDP0000520527
Malus domestica
MDP0000520527
N
MDP0000411586
Malus domestica
MDP0000411586
N
evm.TU.supercontig_3.39
Carica papaya
evm.TU.supercontig_3.39
N
Cucsa.201910
Cucumis sativus
Cucsa.201910
N
30169.m006547
Ricinus communis
30169.m006547
N
Cla004997
Citrullus lanatus
Cla004997
N
BGIOSGA002103
Oryza indica
BGIOSGA002103
N
TCM_015328
Theobroma cacao
TCM_015328
N
Solyc03g007510.2
Solanum lycopersicum
Solyc03g007510.2
N
Sb03g001335
Sorghum bicolor
Sb03g001335
N
PRUPE_ppa002763mg
Prunus persica
PRUPE_ppa002763mg
N
PGSC0003DMG400009096
Solanum tuberosum
PGSC0003DMG400009096
N
OS01G0222700
Oryza sativa
OS01G0222700
N
ORGLA01G0068100
Oryza glaberrima
ORGLA01G0068100
N
OB01G17890
Oryza brachyantha
OB01G17890
N
GLYMA06G12991
Glycine max
GLYMA06G12991
N
BRADI2G07297
Brachypodium distachyon
BRADI2G07297
N