CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GM19154
(
Drosophila sechellia
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0174056
T116115_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
br
M06028_2.00
Drosophila melanogaster
MACTATY
RATAGTK
B1H
Zhu et al.(2011)
br-PA_SANGER_5_FBgn0000210
0.827
1.000
br
M06029_2.00
Drosophila melanogaster
RWHYNWCTAAYG
CRTTAGWNRDWY
B1H
Zhu et al.(2011)
br-PE_SANGER_5_FBgn0000210
0.827
1.000
br
M06030_2.00
Drosophila melanogaster
TGVTCTHKK
MMDAGABCA
B1H
Zhu et al.(2011)
br-PL_SANGER_5_FBgn0000210
0.827
1.000
br
M06031_2.00
Drosophila melanogaster
TCTAATC
GATTAGA
B1H
Zhu et al.(2011)
br_SANGER_10_FBgn0000210
0.827
1.000
br
M06032_2.00
Drosophila melanogaster
YDTCTAATCDN
NHGATTAGAHR
B1H
Zhu et al.(2011)
br_SOLEXA_10_FBgn0000210
0.827
1.000
br
M06033_2.00
Drosophila melanogaster
TKVTAWTT
AAWTABMA
B1H
Zhu et al.(2011)
br-Z1_FlyReg_FBgn0000210
0.827
1.000
br
M06034_2.00
Drosophila melanogaster
WCTAKBWH
DWVMTAGW
B1H
Zhu et al.(2011)
br-Z2_FlyReg_FBgn0000210
0.827
1.000
br
M06035_2.00
Drosophila melanogaster
AMHARYTN
NARYTDKT
B1H
Zhu et al.(2011)
br-Z3_FlyReg_FBgn0000210
0.827
1.000
br
M06036_2.00
Drosophila melanogaster
ATTAKY
RMTAAT
B1H
Zhu et al.(2011)
br-Z4_FlyReg_FBgn0000210
0.827
1.000
BRC1_DROME
M10097_2.00
Drosophila melanogaster
BDNWYTTGTYWWTKAYHW
WDRTMAWWRACAARWNHV
Transfac
Matys et al.(2006)
I$BRCZ1_01
0.827
1.000
br
M10365_2.00
Drosophila melanogaster
DNBDDWHCTATTYNKY
RMNAAATAGDWHHVNH
Transfac
Matys et al.(2006)
I$BRCZ2_01
0.827
1.000
br
M10366_2.00
Drosophila melanogaster
DNNHYTWGTTTWNHN
NDNWAAACWARDNNH
Transfac
Matys et al.(2006)
I$BRCZ3_01
0.827
1.000
br
M10367_2.00
Drosophila melanogaster
WTWWSTTTMYWWW
WWWRKAAASAWAW
Transfac
Matys et al.(2006)
I$BRCZ4_01
0.827
1.000
br
M08446_2.00
Drosophila melanogaster
NWYTTGTYWWTKAY
RTMAWWRACAARWN
COMPILED
Mathelier et al.(2014)
MA0010.1
0.827
1.000
br
M08447_2.00
Drosophila melanogaster
WHCTAKTY
RAMTAGDW
COMPILED
Mathelier et al.(2014)
MA0011.1
0.827
1.000
br
M08448_2.00
Drosophila melanogaster
NNHYTWGTTTW
WAAACWARDNN
COMPILED
Mathelier et al.(2014)
MA0012.1
0.827
1.000
br
M08449_2.00
Drosophila melanogaster
WTWNTTTAYWW
WWRTAAANWAW
COMPILED
Mathelier et al.(2014)
MA0013.1
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0200631
C2H2 ZF
302
325
FRCNPCNKNLSSLTRLKRHIQNVH
FBpp0200631
C2H2 ZF
333
355
VCNICKRVYSSLNSLRNHKSIYH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila sechellia
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MYF5
Otolemur garnettii
ENSOGAG00000001039
I
Brh_R000054
Buceros rhinoceros
Brh_R000054
I
Alligator_sinensis_CCG017419.1
Alligator sinensis
Alligator_sinensis_CCG017419.1
I
ENSXMAG00000017496
Xiphophorus maculatus
ENSXMAG00000017496
I
ENSTGUG00000007755
Taeniopygia guttata
ENSTGUG00000007755
I
ENSSHAG00000013391
Sarcophilus harrisii
ENSSHAG00000013391
I
ENSPSIG00000012000
Pelodiscus sinensis
ENSPSIG00000012000
I
ENSPFOG00000017488
Poecilia formosa
ENSPFOG00000017488
I
myf5
Oryzias latipes
ENSORLG00000016257
I
ENSONIG00000000077
Oreochromis niloticus
ENSONIG00000000077
I
ENSAMXG00000000428
Astyanax mexicanus
ENSAMXG00000000428
I
MYF5
Ornithorhynchus anatinus
ENSOANG00000004853
I
MYF5
Monodelphis domestica
ENSMODG00000020478
I
ENSMGAG00000011091
Meleagris gallopavo
ENSMGAG00000011091
I
ENSMEUG00000010628
Macropus eugenii
ENSMEUG00000010628
I
MYF5
Gallus gallus
ENSGALG00000028091
I
ENSFALG00000010507
Ficedula albicollis
ENSFALG00000010507
I
myf5
Danio rerio
ENSDARG00000007277
I
ENSAPLG00000001124
Anas platyrhynchos
ENSAPLG00000001124
I
ENSCING00000007328
Ciona intestinalis
ENSCING00000007328
N