GE20968 (Drosophila yakuba)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0238253 T117045_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
esg
M06050_2.00 		Drosophila melanogaster
CACCTGH
DCAGGTG		 B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981 		0.827 1.000
wor
M03664_2.00 		Drosophila melanogaster
GYRACAGGTGYAH
DTRCACCTGTYRC		 SELEX
Nitta et al.(2015)
wor_1 		0.769 0.850
wor
M03665_2.00 		Drosophila melanogaster
DTRCACCTGTYGY
RCRACAGGTGYAH		 SELEX
Nitta et al.(2015)
wor_2 		0.769 0.850
wor
M06051_2.00 		Drosophila melanogaster
CACCTGY
RCAGGTG		 B1H
Zhu et al.(2011)
wor_SANGER_2.5_FBgn0001983 		0.769 0.850
wor
M06052_2.00 		Drosophila melanogaster
VCACCTGY
RCAGGTGB		 B1H
Zhu et al.(2011)
wor_SOLEXA_2.5_FBgn0001983 		0.769 0.850
SNAI2
M00221_2.00 		Homo sapiens
HACYTGH
DCARGTD		 PBM
Barrera et al.(2016)
SNAI2_REF 		0.767 0.823
SNAI2
M02873_2.00 		Homo sapiens
VCACCTGYN
NRCAGGTGB		 SELEX
Jolma et al.(2013)
SNAI2_1 		0.767 0.823
SNAI2
M04392_2.00 		Homo sapiens
YGCACCTGYY
RRCAGGTGCR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_HT-SELEX 		0.767 0.823
SNAI2
M04394_2.00 		Homo sapiens
YRCACCTGYY
RRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_HT-SELEX 		0.767 0.823
SNAI2
M08853_2.00 		Homo sapiens
NVCACCTGYY
RRCAGGTGBN		 Misc
Kulakovskiy et al.(2013)
SNAI2_HUMAN.H11MO.0.A 		0.767 0.823
Snai2
M08973_2.00 		Mus musculus
VNRCACCTGYY
RRCAGGTGYNB		 Misc
Kulakovskiy et al.(2013)
SNAI2_MOUSE.H11MO.0.A 		0.767 0.823
SNAI2
M10102_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_01 		0.767 0.823
SNAI2
M10103_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_02 		0.767 0.823
SNAI2
M10104_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6 		0.767 0.823
SNAI2
M00220_2.00 		Homo sapiens
NHACCTGY
RCAGGTDN		 PBM
Barrera et al.(2016)
SNAI2_D119E 		0.767 0.823
SNAI2
M04393_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_Methyl-HT-SELEX 		0.767 0.823
SNAI2
M04395_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_Methyl-HT-SELEX 		0.767 0.823
SNAI2
M00222_2.00 		Homo sapiens
HACYTGHNNN
NNNDCARGTD		 PBM
Barrera et al.(2016)
SNAI2_T234I 		0.763 0.814
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0265978 C2H2 ZF 306 328
FBpp0265978 C2H2 ZF 341 363
FBpp0265978 C2H2 ZF 367 389
FBpp0265978 C2H2 ZF 395 417
FBpp0265978 C2H2 ZF 423 443

Links

Other C2H2 ZF family TFs
Other Drosophila yakuba TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NCU04211 Neurospora crassa NCU04211 D
NEUTE1DRAFT_35710 Neurospora tetrasperma NEUTE1DRAFT_35710 I
estExt_fgenesh1_kg.C_70021 Cryphonectria parasitica estExt_fgenesh1_kg.C_70021 I
fgenesh3_pm.C_scaffold_1000856 Neurospora discreta fgenesh3_pm.C_scaffold_1000856 I
VDBG_00347 Verticillium alfalfae VDBG_00347 I
VDAG_08640 Verticillium dahliae VDAG_08640 I
UCRPA7_5166 Togninia minima UCRPA7_5166 I
THITE_2106492 Thielavia terrestris THITE_2106492 I
SPBR_05954 Sporothrix brasiliensis SPBR_05954 I
SMAC_04386 Sordaria macrospora SMAC_04386 I
PODANS_2_1550 Podospora anserina PODANS_2_1550 I
PFICI_06310 Pestalotiopsis fici PFICI_06310 I
VDBG_00347 Verticillium albo atrum VDBG_00347 I
MYCTH_2089843 Myceliophthora thermophila MYCTH_2089843 I
MGG_07305 Magnaporthe oryzae MGG_07305 I
MAPG_05748 Magnaporthe poae MAPG_05748 I
HMPREF1624_04562 Sporothrix schenckii HMPREF1624_04562 I
GLRG_04277 Colletotrichum graminicola GLRG_04277 I
GGTG_07046 Gaeumannomyces graminis GGTG_07046 I
CSUB01_00795 Colletotrichum sublineola CSUB01_00795 I
CMQ_626 Grosmannia clavigera CMQ_626 I
CHGG_00650 Chaetomium globosum CHGG_00650 I
CFIO01_05516 Colletotrichum fioriniae CFIO01_05516 I