CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NEMVEDRAFT_v1g95177
(
Nematostella vectensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
NEMVEDRAFT_v1g95177
T124294_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDO44435
C2H2 ZF
51
78
YRCRWQGCNRNGKGFNARYKMLIHMRTH
EDO44435
C2H2 ZF
84
108
HKCTFDSCEKSFSRLENLKIHQRSH
EDO44435
C2H2 ZF
114
138
YSCPIEGCDKRYSNSSDRFKHTRTH
EDO44435
C2H2 ZF
144
169
YHCRIEGCEKRYTDPSSLRKHLKTYH
Links
Other
C2H2 ZF
family TFs
Other
Nematostella vectensis
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACYPI005969
Acyrthosiphon pisum
ACYPI005969
I
0.766
AMTR_s00010p00122680
Amborella trichopoda
AMTR_s00010p00122680
I
AMTR_s00023p00181320
Amborella trichopoda
AMTR_s00023p00181320
I
WOX14
Arabidopsis thaliana
AT1G20700
I
WOX10
Arabidopsis thaliana
AT1G20710
I
WOX6
Arabidopsis thaliana
AT2G01500
I
WOX3
Arabidopsis thaliana
AT2G28610
I
WOX5
Arabidopsis thaliana
AT3G11260
I
WOX1
Arabidopsis thaliana
AT3G18010
I
WOX5
Oryza indica
BGIOSGA000516
I
WOX2
Oryza indica
BGIOSGA019069
I
WOX3
Oryza indica
BGIOSGA036831
I
Bo09314s010
Brassica oleracea
Bo09314s010
I
Bo3g040080
Brassica oleracea
Bo3g040080
I
Bo3g071360
Brassica oleracea
Bo3g071360
I
Bo3g155580
Brassica oleracea
Bo3g155580
I
Bo4g165520
Brassica oleracea
Bo4g165520
I
Bo5g030590
Brassica oleracea
Bo5g030590
I
Bo5g121370
Brassica oleracea
Bo5g121370
I
Bo5g136700
Brassica oleracea
Bo5g136700
I
Bo7g061410
Brassica oleracea
Bo7g061410
I
Bo7g117480
Brassica oleracea
Bo7g117480
I
Bra000484
Brassica rapa
Bra000484
I
Bra001694
Brassica rapa
Bra001694
I
Bra010531
Brassica rapa
Bra010531
I
Bra012245
Brassica rapa
Bra012245
I
Bra017720
Brassica rapa
Bra017720
I
Bra022267
Brassica rapa
Bra022267
I
Bra025839
Brassica rapa
Bra025839
I
Bra035688
Brassica rapa
Bra035688
I
BRADI2G37650
Brachypodium distachyon
BRADI2G37650
I
F775_04029
Aegilops tauschii
F775_04029
I
F775_52565
Aegilops tauschii
F775_52565
I
WOX14
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_1001881
I
WOX10
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1001761
I
fgenesh2_kg.143__1__AT3G18010.1
Arabidopsis lyrata
fgenesh2_kg.143__1__AT3G18010.1
I
WOX5
Arabidopsis lyrata
fgenesh2_kg.3__1167__AT3G11260.1
I
fgenesh2_kg.3__1989__AT3G18010.1
Arabidopsis lyrata
fgenesh2_kg.3__1989__AT3G18010.1
I
PRS
Arabidopsis lyrata
fgenesh2_kg.4__832__AT2G28610.1
I
PFS2
Arabidopsis lyrata
fgenesh2_kg.5__60__AT2G01500.1
I
GLYMA02G10410
Glycine max
GLYMA02G10410
I
GLYMA05G33850
Glycine max
GLYMA05G33850
I
GLYMA07G11372
Glycine max
GLYMA07G11372
I
GLYMA07G15710
Glycine max
GLYMA07G15710
I
GLYMA07G34425
Glycine max
GLYMA07G34425
I
GLYMA08G05831
Glycine max
GLYMA08G05831
I
GLYMA09G30831
Glycine max
GLYMA09G30831
I
GLYMA10G43580
Glycine max
GLYMA10G43580
I
GLYMA11G14940
Glycine max
GLYMA11G14940
I
GLYMA18G39520
Glycine max
GLYMA18G39520
I
GLYMA18G52491
Glycine max
GLYMA18G52491
I
GLYMA20G02161
Glycine max
GLYMA20G02161
I
GLYMA20G23220
Glycine max
GLYMA20G23220
I
GRMZM2G069028
Zea mays
GRMZM2G069028
I
GRMZM2G108933
Zea mays
GRMZM2G108933
I
GRMZM2G122537
Zea mays
GRMZM2G122537
I
GRMZM2G140083
Zea mays
GRMZM2G140083
I
GSMUA_Achr10G07260_001
Musa acuminata
GSMUA_Achr10G07260_001
I
GSMUA_Achr2G16080_001
Musa acuminata
GSMUA_Achr2G16080_001
I
GSMUA_Achr3G14840_001
Musa acuminata
GSMUA_Achr3G14840_001
I
GSMUA_Achr4G25530_001
Musa acuminata
GSMUA_Achr4G25530_001
I
GSMUA_Achr4G29470_001
Musa acuminata
GSMUA_Achr4G29470_001
I
GSMUA_Achr4G30610_001
Musa acuminata
GSMUA_Achr4G30610_001
I
GSMUA_Achr5G29220_001
Musa acuminata
GSMUA_Achr5G29220_001
I
GSMUA_Achr7G04050_001
Musa acuminata
GSMUA_Achr7G04050_001
I
GSMUA_Achr7G18230_001
Musa acuminata
GSMUA_Achr7G18230_001
I
GSMUA_Achr8G02040_001
Musa acuminata
GSMUA_Achr8G02040_001
I
GSMUA_Achr9G04090_001
Musa acuminata
GSMUA_Achr9G04090_001
I
LPERR01G31590
Leersia perrieri
LPERR01G31590
I
LPERR05G01200
Leersia perrieri
LPERR05G01200
I
LPERR11G00110
Leersia perrieri
LPERR11G00110
I
LPERR12G00390
Leersia perrieri
LPERR12G00390
I
MLOC_7772
Hordeum vulgare
MLOC_7772
I
MTR_1g115315
Medicago truncatula
MTR_1g115315
I
MTR_3g115620
Medicago truncatula
MTR_3g115620
I
MTR_4g084550
Medicago truncatula
MTR_4g084550
I
MTR_7g023810
Medicago truncatula
MTR_7g023810
I
MTR_7g060630
Medicago truncatula
MTR_7g060630
I
MTR_8g107210
Medicago truncatula
MTR_8g107210
I
OB05G11440
Oryza brachyantha
OB05G11440
I
OB05G19220
Oryza brachyantha
OB05G19220
I
OBART05G01300
Oryza barthii
OBART05G01300
I
OBART11G00060
Oryza barthii
OBART11G00060
I
OGLUM01G40630
Oryza glumaepatula
OGLUM01G40630
I
OGLUM05G01320
Oryza glumaepatula
OGLUM05G01320
I
OGLUM11G00100
Oryza glumaepatula
OGLUM11G00100
I
OGLUM12G00010
Oryza glumaepatula
OGLUM12G00010
I
OLONG_026278
Oryza longistaminata
OLONG_026278
I
OMERI01G33830
Oryza meridionalis
OMERI01G33830
I
OMERI05G01360
Oryza meridionalis
OMERI05G01360
I
OMERI11G00160
Oryza meridionalis
OMERI11G00160
I
ONIVA01G41850
Oryza nivara
ONIVA01G41850
I
ONIVA05G01350
Oryza nivara
ONIVA05G01350
I
ONIVA11G00010
Oryza nivara
ONIVA11G00010
I
ONIVA12G00010
Oryza nivara
ONIVA12G00010
I
OPUNC01G35610
Oryza punctata
OPUNC01G35610
I
OPUNC05G01220
Oryza punctata
OPUNC05G01220
I
OPUNC11G00180
Oryza punctata
OPUNC11G00180
I
OPUNC12G00190
Oryza punctata
OPUNC12G00190
I
ORGLA01G0305600
Oryza glaberrima
ORGLA01G0305600
I
ORGLA11G0000600
Oryza glaberrima
ORGLA11G0000600
I
ORUFI04G30250
Oryza rufipogon
ORUFI04G30250
I
ORUFI05G01360
Oryza rufipogon
ORUFI05G01360
I
ORUFI09G15510
Oryza rufipogon
ORUFI09G15510
I
OS01G0840300
Oryza sativa
OS01G0840300
I
WOX2
Oryza sativa
OS05G0118700
I
OS11G0102100
Oryza sativa
OS11G0102100
I
OS12G0101600
Oryza sativa
OS12G0101600
I
PGSC0003DMG400001565
Solanum tuberosum
PGSC0003DMG400001565
I
PGSC0003DMG400005670
Solanum tuberosum
PGSC0003DMG400005670
I
PGSC0003DMG400006609
Solanum tuberosum
PGSC0003DMG400006609
I
PGSC0003DMG400025358
Solanum tuberosum
PGSC0003DMG400025358
I
POPTR_0002s00980
Populus trichocarpa
POPTR_0002s00980
I
POPTR_0005s27410
Populus trichocarpa
POPTR_0005s27410
I
WOX1
Populus trichocarpa
POPTR_0010s12150
I
POPTR_0012s04510
Populus trichocarpa
POPTR_0012s04510
I
POPTR_0015s04520
Populus trichocarpa
POPTR_0015s04520
I
PRUPE_ppa017419mg
Prunus persica
PRUPE_ppa017419mg
I
PRUPE_ppa019793mg
Prunus persica
PRUPE_ppa019793mg
I
Sb05g003490
Sorghum bicolor
Sb05g003490
I
Sb09g002010
Sorghum bicolor
Sb09g002010
I
SELMODRAFT_115439
Selaginella moellendorffii
SELMODRAFT_115439
I
SELMODRAFT_123325
Selaginella moellendorffii
SELMODRAFT_123325
I
SELMODRAFT_404178
Selaginella moellendorffii
SELMODRAFT_404178
I
SELMODRAFT_407157
Selaginella moellendorffii
SELMODRAFT_407157
I
SELMODRAFT_417553
Selaginella moellendorffii
SELMODRAFT_417553
I
SELMODRAFT_419270
Selaginella moellendorffii
SELMODRAFT_419270
I
SELMODRAFT_438787
Selaginella moellendorffii
SELMODRAFT_438787
I
SELMODRAFT_451015
Selaginella moellendorffii
SELMODRAFT_451015
I
SELMODRAFT_451353
Selaginella moellendorffii
SELMODRAFT_451353
I
SELMODRAFT_451355
Selaginella moellendorffii
SELMODRAFT_451355
I
SELMODRAFT_84885
Selaginella moellendorffii
SELMODRAFT_84885
I
Si004427m.g
Setaria italica
Si004427m.g
I
Si012474m.g
Setaria italica
Si012474m.g
I
Si022944m.g
Setaria italica
Si022944m.g
I
Si027421m.g
Setaria italica
Si027421m.g
I
Solyc02g082670.2
Solanum lycopersicum
Solyc02g082670.2
I
Solyc03g118770.2
Solanum lycopersicum
Solyc03g118770.2
I
Solyc11g072770.1
Solanum lycopersicum
Solyc11g072770.1
I
Solyc11g072790.1
Solanum lycopersicum
Solyc11g072790.1
I
TCM_010888
Theobroma cacao
TCM_010888
I
TCM_012755
Theobroma cacao
TCM_012755
I
TCM_034409
Theobroma cacao
TCM_034409
I
TCM_041963
Theobroma cacao
TCM_041963
I
Traes_1AS_3CA8D36FB
Triticum aestivum
Traes_1AS_3CA8D36FB
I
Traes_1BS_C908081B8
Triticum aestivum
Traes_1BS_C908081B8
I
Traes_1DS_E50CDDF05
Triticum aestivum
Traes_1DS_E50CDDF05
I
Traes_3AS_9079D6B71
Triticum aestivum
Traes_3AS_9079D6B71
I
Traes_5BL_2E6FA4A97
Triticum aestivum
Traes_5BL_2E6FA4A97
I
Traes_5BS_439DB52FE
Triticum aestivum
Traes_5BS_439DB52FE
I
Traes_5DL_193218298
Triticum aestivum
Traes_5DL_193218298
I
Traes_5DS_903A67B97
Triticum aestivum
Traes_5DS_903A67B97
I
TRIUR3_16981
Triticum urartu
TRIUR3_16981
I
WOX1
Vitis vinifera
VIT_01s0011g05020
I
VIT_04s0044g00160
Vitis vinifera
VIT_04s0044g00160
I
PRS
Vitis vinifera
VIT_06s0004g03780
I
VIT_17s0000g02460
Vitis vinifera
VIT_17s0000g02460
I
VIT_18s0122g01140
Vitis vinifera
VIT_18s0122g01140
I
Ca_04823
Cicer arietinum
Ca_04823
I
Ca_06508
Cicer arietinum
Ca_06508
I
Ca_10352
Cicer arietinum
Ca_10352
I
Ca_18623
Cicer arietinum
Ca_18623
I
Ca_19383
Cicer arietinum
Ca_19383
I
Ca_19386
Cicer arietinum
Ca_19386
I
Cla009089
Citrullus lanatus
Cla009089
I
Cla018739
Citrullus lanatus
Cla018739
I
Cla019215
Citrullus lanatus
Cla019215
I
Cla023819
Citrullus lanatus
Cla023819
I
Pm000753
Prunus mume
Pm000753
I
Pm025084
Prunus mume
Pm025084
I
28102.m000106
Ricinus communis
28102.m000106
I
29816.m000691
Ricinus communis
29816.m000691
I
30039.m000243
Ricinus communis
30039.m000243
I
30170.m014389
Ricinus communis
30170.m014389
I
cassava13526.valid.m1
Manihot esculenta
cassava13526.valid.m1
I
cassava16590.m1
Manihot esculenta
cassava16590.m1
I
cassava21140.m1
Manihot esculenta
cassava21140.m1
I
cassava26411.m1
Manihot esculenta
cassava26411.m1
I
cassava32199.m1
Manihot esculenta
cassava32199.m1
I
cassava39214.m1
Manihot esculenta
cassava39214.m1
I
cassava41581.m1
Manihot esculenta
cassava41581.m1
I
Cucsa.111520
Cucumis sativus
Cucsa.111520
I
Cucsa.121900
Cucumis sativus
Cucsa.121900
I
Cucsa.272210
Cucumis sativus
Cucsa.272210
I
Cucsa.323040
Cucumis sativus
Cucsa.323040
I
estExt_fgenesh1_pg.C_90244
Micromonas pusilla
estExt_fgenesh1_pg.C_90244
I
fgenesh1_pg.scaffold_217000007
Physcomitrella patens
fgenesh1_pg.scaffold_217000007
I
gw1.224.39.1
Physcomitrella patens
gw1.224.39.1
I
gw1.29.10.1
Physcomitrella patens
gw1.29.10.1
I
mgf006573m
Mimulus guttatus
mgf006573m
I
mgf021746m
Mimulus guttatus
mgf021746m
I
mgf023275m
Mimulus guttatus
mgf023275m
I
Aquca_007_00901
Aquilegia coerulea
Aquca_007_00901
I
Aquca_015_00333
Aquilegia coerulea
Aquca_015_00333
I
Aquca_027_00327
Aquilegia coerulea
Aquca_027_00327
I
Aquca_046_00011
Aquilegia coerulea
Aquca_046_00011
I
Aquca_091_00003
Aquilegia coerulea
Aquca_091_00003
I
Bostr.19424s0870
Boechera stricta
Bostr.19424s0870
I
Bostr.19424s1059
Boechera stricta
Bostr.19424s1059
I
Bostr.27991s0061
Boechera stricta
Bostr.27991s0061
I
Bostr.3717s0001
Boechera stricta
Bostr.3717s0001
I
Bostr.7128s0661
Boechera stricta
Bostr.7128s0661
I
Bostr.7903s0027
Boechera stricta
Bostr.7903s0027
I
Cagra.0456s0008
Capsella grandiflora
Cagra.0456s0008
I
Cagra.1655s0045
Capsella grandiflora
Cagra.1655s0045
I
Cagra.2235s0008
Capsella grandiflora
Cagra.2235s0008
I
Cagra.5013s0004
Capsella grandiflora
Cagra.5013s0004
I
Cagra.6160s0025
Capsella grandiflora
Cagra.6160s0025
I
Cagra.6160s0026
Capsella grandiflora
Cagra.6160s0026
I
Carubv10010349m.g
Capsella rubella
Carubv10010349m.g
I
Carubv10012447m.g
Capsella rubella
Carubv10012447m.g
I
Carubv10013929m.g
Capsella rubella
Carubv10013929m.g
I
Carubv10016169m.g
Capsella rubella
Carubv10016169m.g
I
Carubv10018421m.g
Capsella rubella
Carubv10018421m.g
I
Carubv10024767m.g
Capsella rubella
Carubv10024767m.g
I
Ciclev10002354m.g
Citrus clementina
Ciclev10002354m.g
I
Ciclev10008783m.g
Citrus clementina
Ciclev10008783m.g
I
Ciclev10017657m.g
Citrus clementina
Ciclev10017657m.g
I
Ciclev10030293m.g
Citrus clementina
Ciclev10030293m.g
I
Eucgr.B00945
Eucalyptus grandis
Eucgr.B00945
I
Eucgr.B02435
Eucalyptus grandis
Eucgr.B02435
I
EuGene.0600010372
Micromonas sp RCC299
EuGene.0600010372
I
evm.TU.supercontig_26.173
Carica papaya
evm.TU.supercontig_26.173
I
evm.TU.supercontig_3.402
Carica papaya
evm.TU.supercontig_3.402
I
evm.TU.supercontig_65.159
Carica papaya
evm.TU.supercontig_65.159
I
gene09389-v1.0-hybrid
Fragaria vesca
gene09389-v1.0-hybrid
I
gene14025-v1.0-hybrid
Fragaria vesca
gene14025-v1.0-hybrid
I
gene20491-v1.0-hybrid
Fragaria vesca
gene20491-v1.0-hybrid
I
gene30464-v1.0-hybrid
Fragaria vesca
gene30464-v1.0-hybrid
I
gene32456-v1.0-hybrid
Fragaria vesca
gene32456-v1.0-hybrid
I
Gorai.002G178400
Gossypium raimondii
Gorai.002G178400
I
Gorai.004G038300
Gossypium raimondii
Gorai.004G038300
I
Gorai.007G372000
Gossypium raimondii
Gorai.007G372000
I
Gorai.008G289800
Gossypium raimondii
Gorai.008G289800
I
Gorai.009G103500
Gossypium raimondii
Gorai.009G103500
I
Lus10016026.g
Linum usitatissimum
Lus10016026.g
I
Lus10016569.g
Linum usitatissimum
Lus10016569.g
I
Lus10018011.g
Linum usitatissimum
Lus10018011.g
I
Lus10023561.g
Linum usitatissimum
Lus10023561.g
I
Lus10038480.g
Linum usitatissimum
Lus10038480.g
I
Lus10040447.g
Linum usitatissimum
Lus10040447.g
I
Lus10040840.g
Linum usitatissimum
Lus10040840.g
I
Lus10042007.g
Linum usitatissimum
Lus10042007.g
I
MDP0000144307
Malus domestica
MDP0000144307
I
MDP0000163159
Malus domestica
MDP0000163159
I
MDP0000219162
Malus domestica
MDP0000219162
I
MDP0000224466
Malus domestica
MDP0000224466
I
MDP0000293200
Malus domestica
MDP0000293200
I
MDP0000445859
Malus domestica
MDP0000445859
I
MDP0000851699
Malus domestica
MDP0000851699
I
orange1.1g026809m.g
Citrus sinensis
orange1.1g026809m.g
I
orange1.1g035594m.g
Citrus sinensis
orange1.1g035594m.g
I
orange1.1g039144m.g
Citrus sinensis
orange1.1g039144m.g
I
orange1.1g043602m.g
Citrus sinensis
orange1.1g043602m.g
I
Pavir.Ca00701
Panicum virgatum
Pavir.Ca00701
I
Pavir.Ea03339
Panicum virgatum
Pavir.Ea03339
I
Pavir.Eb03715
Panicum virgatum
Pavir.Eb03715
I
Pavir.J22602
Panicum virgatum
Pavir.J22602
I
Pavir.J24082
Panicum virgatum
Pavir.J24082
I
Pavir.J34412
Panicum virgatum
Pavir.J34412
I
SapurV1A.0016s0590
Salix purpurea
SapurV1A.0016s0590
I
SapurV1A.0266s0300
Salix purpurea
SapurV1A.0266s0300
I
SapurV1A.0351s0200
Salix purpurea
SapurV1A.0351s0200
I
SapurV1A.0357s0040
Salix purpurea
SapurV1A.0357s0040
I
SapurV1A.0406s0010
Salix purpurea
SapurV1A.0406s0010
I
SapurV1A.0718s0010
Salix purpurea
SapurV1A.0718s0010
I
SapurV1A.2168s0010
Salix purpurea
SapurV1A.2168s0010
I
Thhalv10001174m.g
Eutrema salsugineum
Thhalv10001174m.g
I
Thhalv10008824m.g
Eutrema salsugineum
Thhalv10008824m.g
I
Thhalv10009917m.g
Eutrema salsugineum
Thhalv10009917m.g
I
Thhalv10017168m.g
Eutrema salsugineum
Thhalv10017168m.g
I
Thhalv10022017m.g
Eutrema salsugineum
Thhalv10022017m.g
I
Thhalv10022042m.g
Eutrema salsugineum
Thhalv10022042m.g
I
PK07880.1
Cannabis sativa
PK07880.1
I
PK07906.1
Cannabis sativa
PK07906.1
I
PK14252.1
Cannabis sativa
PK14252.1
I
chr4.CM0042.2350.nc
Lotus japonicus
chr4.CM0042.2350.nc
I
chr5.CM0180.70.nc
Lotus japonicus
chr5.CM0180.70.nc
I
LjSGA_059316.1
Lotus japonicus
LjSGA_059316.1
I
LjSGA_080218.1
Lotus japonicus
LjSGA_080218.1
I
LjSGA_115909.1
Lotus japonicus
LjSGA_115909.1
I
LjT41B11.90.nd
Lotus japonicus
LjT41B11.90.nd
I
PDK_20s1363982g001
Phoenix dactylifera
PDK_20s1363982g001
I
CGI_10026910
Crassostrea gigas
CGI_10026910
N
0.764
ENSAMXG00000018801
Astyanax mexicanus
ENSAMXG00000018801
N
0.763
glis2a
Danio rerio
ENSDARG00000078388
N
0.763
glis2b
Danio rerio
ENSDARG00000100232
N
0.763
glis2b
Gasterosteus aculeatus
ENSGACG00000011323
N
0.763
ENSGMOG00000014914
Gadus morhua
ENSGMOG00000014914
N
0.763
ENSLOCG00000002612
Lepisosteus oculatus
ENSLOCG00000002612
N
0.763
ENSONIG00000005197
Oreochromis niloticus
ENSONIG00000005197
N
0.763
glis2b
Oryzias latipes
ENSORLG00000008275
N
0.763
ENSPFOG00000009286
Poecilia formosa
ENSPFOG00000009286
N
0.763
ENSPFOG00000011330
Poecilia formosa
ENSPFOG00000011330
N
0.763
glis2b
Takifugu rubripes
ENSTRUG00000006205
N
0.763
ENSXMAG00000004642
Xiphophorus maculatus
ENSXMAG00000004642
N
0.763
ENSXMAG00000013848
Xiphophorus maculatus
ENSXMAG00000013848
N
0.763
LotgiG97849
Lottia gigantea
LotgiG97849
N
0.763
glis2.S
Xenopus laevis
XB-GENE-6251812
N
0.763