PICST_68294 (Scheffersomyces stipitis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 PICST_68294 T126359_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CaO19.6121
M01036_2.00 		Candida albicans
NCCCCTDDNN
NNHHAGGGGN		 PBM
Siggers et al.(2014)
Mnl1_orf19.6121Calb 		0.762 0.870
RO3G_07016
M01436_2.00 		Rhizopus oryzae
NNCYCCYNN
NNRGGRGNN		 PBM
Najafabadi et al.(2015a)
pTH10224 		0.760 0.630
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ABN68060 C2H2 ZF 928 951
ABN68060 C2H2 ZF 957 979

Links

Other C2H2 ZF family TFs
Other Scheffersomyces stipitis TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RO3G_07016 Rhizopus oryzae RO3G_07016 D 0.760
CaO19.6121 Candida albicans CaO19.6121 D 0.762
GNLVRS01_PISO0K16554g Millerozyma farinosa GNLVRS01_PISO0K16554g I 0.812
Kwal_17241 Kluyveromyces waltii Kwal_17241 I 0.777
KLTH0E06688g Kluyveromyces thermotolerans KLTH0E06688g I 0.777
estExt_fgenesh1_pg.C_chr_7.10133 Pichia stipitis estExt_fgenesh1_pg.C_chr_7.10133 I 0.827
ZYRO0G19140g Zygosaccharomyces rouxii ZYRO0G19140g I 0.759
SPAPADRAFT_59332 Spathaspora passalidarum SPAPADRAFT_59332 I 0.792
KNAG_0D02120 Kazachstania naganishii KNAG_0D02120 I 0.758
KLTH0E06688g Lachancea thermotolerans KLTH0E06688g I 0.777
KAFR_0B02160 Kazachstania africana KAFR_0B02160 I 0.759
GNLVRS01_PISO0L16555g Millerozyma farinosa GNLVRS01_PISO0L16555g I 0.812
CPAG_00149 Candida parapsilosis CPAG_00149 I 0.767
G210_4804 Candida maltosa G210_4804 I 0.816
DEHA2E03828g Debaryomyces hansenii DEHA2E03828g I 0.822
CTRG_03074 Candida tropicalis CTRG_03074 I 0.762
CORT_0D04470 Candida orthopsilosis CORT_0D04470 I 0.767
CD36_33070 Candida dubliniensis CD36_33070 I 0.762
CaO19.13540 Candida albicans CaO19.13540 I 0.762
AGOS_ACL057W Ashbya gossypii AGOS_ACL057W I 0.759
AACERI_AaceriACL057W Saccharomycetaceae sp ashbya aceri AACERI_AaceriACL057W I 0.759
PGUG_03478 Meyerozyma guilliermondii PGUG_03478 N 0.793
TBLA_0F00370 Tetrapisispora blattae TBLA_0F00370 N 0.764
PGUG_03478 Candida guilliermondii PGUG_03478 N 0.793