CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PV11_09518
(
Exophiala sideris
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PV11_09518
T127727_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU03184
M01474_2.00
Neurospora crassa
NDNNVATCNN
NNGATBNNHN
PBM
Najafabadi et al.(2015a)
pTH10252
0.793
0.826
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIV77737
C2H2 ZF
274
296
YICPTCRKPFSRPSSLRIHGHSH
KIV77737
C2H2 ZF
302
327
YVCKYPGCGKSFSVRSNMKRHERGCH
Links
Other
C2H2 ZF
family TFs
Other
Exophiala sideris
TFs
125 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Gorai.005G097100
Gossypium raimondii
Gorai.005G097100
N
29596.m000720
Ricinus communis
29596.m000720
N
cassava1724.valid.m1
Manihot esculenta
cassava1724.valid.m1
N
cassava249.valid.m1
Manihot esculenta
cassava249.valid.m1
N
Cucsa.160530
Cucumis sativus
Cucsa.160530
N
Ciclev10002056m.g
Citrus clementina
Ciclev10002056m.g
N
Eucgr.F02157
Eucalyptus grandis
Eucgr.F02157
N
evm.TU.supercontig_3189.1
Carica papaya
evm.TU.supercontig_3189.1
N
gene26537-v1.0-hybrid
Fragaria vesca
gene26537-v1.0-hybrid
N
Pm004390
Prunus mume
Pm004390
N
Gorai.009G279200
Gossypium raimondii
Gorai.009G279200
N
Gorai.010G033500
Gossypium raimondii
Gorai.010G033500
N
MDP0000303048
Malus domestica
MDP0000303048
N
orange1.1g022924m.g
Citrus sinensis
orange1.1g022924m.g
N
SapurV1A.0004s0630
Salix purpurea
SapurV1A.0004s0630
N
PK04210.1
Cannabis sativa
PK04210.1
N
chr1.CM0289.360.nc
Lotus japonicus
chr1.CM0289.360.nc
N
LjT45A20.70.nd
Lotus japonicus
LjT45A20.70.nd
N
PRUPE_ppa009340mg
Prunus persica
PRUPE_ppa009340mg
N
GLYMA02G37980
Glycine max
GLYMA02G37980
N
GLYMA04G10330
Glycine max
GLYMA04G10330
N
GLYMA06G10280
Glycine max
GLYMA06G10280
N
GLYMA14G36150
Glycine max
GLYMA14G36150
N
MTR_5g066510
Medicago truncatula
MTR_5g066510
N
PGSC0003DMG400033576
Solanum tuberosum
PGSC0003DMG400033576
N
POPTR_0002s11150
Populus trichocarpa
POPTR_0002s11150
N
POPTR_0005s19580
Populus trichocarpa
POPTR_0005s19580
N
AMTR_s00019p00253580
Amborella trichopoda
AMTR_s00019p00253580
N
Solyc01g106030.2
Solanum lycopersicum
Solyc01g106030.2
N
Solyc10g047640.1
Solanum lycopersicum
Solyc10g047640.1
N
TCM_034530
Theobroma cacao
TCM_034530
N
VIT_03s0038g00480
Vitis vinifera
VIT_03s0038g00480
N
TIFY1
Vitis vinifera
VIT_18s0001g07720
N
Ca_14968
Cicer arietinum
Ca_14968
N
Cla022486
Citrullus lanatus
Cla022486
N