Traes_3AL_35CA14632 (Triticum aestivum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Traes_3AL_35CA14632 T130554_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IDD1
M06824_2.00 		Arabidopsis thaliana
DNTTTTGTCKTTTWBYD
HRVWAAAMGACAAAANH		 Dap-seq
OMalley et al.(2016)
At5g66730_colamp_a 		0.822 0.952
IDD1
M06825_2.00 		Arabidopsis thaliana
WDTTTTGTCKTTTWNYD
HRNWAAAMGACAAAAHW		 Dap-seq
OMalley et al.(2016)
At5g66730_col 		0.822 0.952
IDD5
M06807_2.00 		Arabidopsis thaliana
DNTTTTGTCKTTTTSYD
HRSAAAAMGACAAAANH		 Dap-seq
OMalley et al.(2016)
IDD5_colamp_a 		0.794 0.905
IDD5
M06808_2.00 		Arabidopsis thaliana
WTTTTGTCKTTTWSYD
HRSWAAAMGACAAAAW		 Dap-seq
OMalley et al.(2016)
IDD5_col 		0.794 0.905
AT1G14580
M06797_2.00 		Arabidopsis thaliana
NNNWWTTTTGTCKTTTWSYD
HRSWAAAMGACAAAAWWNNN		 Dap-seq
OMalley et al.(2016)
At1g14580_col_a 		0.794 0.881
AT1G14580
M06798_2.00 		Arabidopsis thaliana
NNTTTTGTCKTTTWSYD
HRSWAAAMGACAAAANN		 Dap-seq
OMalley et al.(2016)
At1g14580_colamp_a 		0.794 0.881
IDD7
M06803_2.00 		Arabidopsis thaliana
NDDTTTTGTCKTTTWBYD
HRVWAAAMGACAAAAHHN		 Dap-seq
OMalley et al.(2016)
IDD7_col_a 		0.788 0.881
IDD4
M06809_2.00 		Arabidopsis thaliana
WWTTTTGTCKTTTWSYD
HRSWAAAMGACAAAAWW		 Dap-seq
OMalley et al.(2016)
IDD4_col_a 		0.788 0.857
MGP
M06795_2.00 		Arabidopsis thaliana
HNHDWTTTTGTCKTTTWNYD
HRNWAAAMGACAAAAWHDND		 Dap-seq
OMalley et al.(2016)
MGP_col_a 		0.788 0.857
MGP
M06796_2.00 		Arabidopsis thaliana
NNDTTTTGTCKTTTWBYD
HRVWAAAMGACAAAAHNN		 Dap-seq
OMalley et al.(2016)
MGP_colamp_a 		0.788 0.857
NUC
M06822_2.00 		Arabidopsis thaliana
NNNNNTTTTGTCKTYTWBYD
HRVWARAMGACAAAANNNNN		 Dap-seq
OMalley et al.(2016)
NUC_col_a 		0.765 0.833
NUC
M06823_2.00 		Arabidopsis thaliana
NDTTTTGTCGTYTWNYD
HRNWARACGACAAAAHN		 Dap-seq
OMalley et al.(2016)
NUC_colamp_a 		0.765 0.833
JKD
M06818_2.00 		Arabidopsis thaliana
HHNWWTTTTGTCKTTTWBYD
HRVWAAAMGACAAAAWWNDD		 Dap-seq
OMalley et al.(2016)
JKD_col_a 		0.759 0.857
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_3AL_35CA14632.1 C2H2 ZF 158 179
Traes_3AL_35CA14632.1 C2H2 ZF 179 204

Links

Other C2H2 ZF family TFs
Other Triticum aestivum TFs

665 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LCORL Homo sapiens ENSG00000178177 D
ENSTSYG00000014055 Tarsius syrichta ENSTSYG00000014055 I
ENSOARG00000004333 Ovis aries ENSOARG00000004333 I
LCORL Oryctolagus cuniculus ENSOCUG00000006802 I
LCORL Otolemur garnettii ENSOGAG00000005593 I
ENSPANG00000024022 Papio anubis ENSPANG00000024022 I
LCORL Procavia capensis ENSPCAG00000007105 I
ENSPSIG00000017051 Pelodiscus sinensis ENSPSIG00000017051 I
LCORL Pan troglodytes ENSPTRG00000015943 I
LCORL Pteropus vampyrus ENSPVAG00000013601 I
ENSSHAG00000015746 Sarcophilus harrisii ENSSHAG00000015746 I
LCORL Sus scrofa ENSSSCG00000008748 I
ENSSTOG00000000960 Ictidomys tridecemlineatus ENSSTOG00000000960 I
LCORL Taeniopygia guttata ENSTGUG00000009625 I
ENSNLEG00000016679 Nomascus leucogenys ENSNLEG00000016679 I
LCORL Tursiops truncatus ENSTTRG00000016951 I
LCORL Vicugna pacos ENSVPAG00000010356 I
Aan_R007397 Calypte anna Aan_R007397 I
Afo_R006360 Aptenodytes forsteri Afo_R006360 I
Alligator_sinensis_CCG006744.1 Alligator sinensis Alligator_sinensis_CCG006744.1 I
Brh_R013202 Buceros rhinoceros Brh_R013202 I
ENSP00000371661-D1 Bos grunniens ENSP00000371661-D1 I
ENSP00000371661 Macaca fascicularis ENSP00000371661 I
Gfo_R010322 Geospiza fortis Gfo_R010322 I
Myotis_brandtii_LCORL_10024397 Myotis brandtii Myotis_brandtii_LCORL_10024397 I
Ogr00836 Ophisaurus gracilis Ogr00836 I
Pvit_18026 Pogona vitticeps Pvit_18026 I
ENSFALG00000009227 Ficedula albicollis ENSFALG00000009227 I
ENSAMEG00000000192 Ailuropoda melanoleuca ENSAMEG00000000192 I
ENSAPLG00000006384 Anas platyrhynchos ENSAPLG00000006384 I
LCORL Bos taurus ENSBTAG00000046561 I
LCORL Canis familiaris ENSCAFG00000016672 I
LCORL Callithrix jacchus ENSCJAG00000012800 I
ENSCPOG00000003269 Cavia porcellus ENSCPOG00000003269 I
ENSCSAG00000016522 Chlorocebus sabaeus ENSCSAG00000016522 I
lcorl Danio rerio ENSDARG00000070098 I
LCORL Dasypus novemcinctus ENSDNOG00000001545 I
ENSDORG00000003797 Dipodomys ordii ENSDORG00000003797 I
LCORL Equus caballus ENSECAG00000000648 I
LCORL Erinaceus europaeus ENSEEUG00000000419 I
LCORL Anolis carolinensis ENSACAG00000002012 I
LCORL Felis catus ENSFCAG00000029474 I
LCORL Gallus gallus ENSGALG00000014421 I
LCORL Gorilla gorilla ENSGGOG00000014894 I
ENSLACG00000017771 Latimeria chalumnae ENSLACG00000017771 I
LCORL Loxodonta africana ENSLAFG00000009691 I
LCORL Meleagris gallopavo ENSMGAG00000012554 I
ENSMICG00000008878 Microcebus murinus ENSMICG00000008878 I
LCORL Myotis lucifugus ENSMLUG00000013781 I
LCORL Monodelphis domestica ENSMODG00000000757 I
ENSMPUG00000002301 Mustela putorius furo ENSMPUG00000002301 I
Lcorl Mus musculus ENSMUSG00000015882 I