CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Traes_6BL_CC009B78A
(
Triticum aestivum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
Traes_6BL_CC009B78A
T130635_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_6BL_CC009B78A.2
C2H2 ZF
116
140
FLCSYDGCGKTFVDAGALRKHAHVH
Traes_6BL_CC009B78A.2
C2H2 ZF
145
169
YVCHYEGCGKKFLDSSKLKRHFLIH
Traes_6BL_CC009B78A.2
C2H2 ZF
175
199
FVCPHEGCGKAFSLDFNLKAHMKTH
Traes_6BL_CC009B78A.2
C2H2 ZF
205
230
HMCPYPECGRRFTQESKLRAHFRAQH
Traes_6BL_CC009B78A.2
C2H2 ZF
271
296
YVCPYDGCAKAYIHEYKLNLHLKKEH
Links
Other
C2H2 ZF
family TFs
Other
Triticum aestivum
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA008411
Oryza indica
BGIOSGA008411
N
0.808
BRADI3G45590
Brachypodium distachyon
BRADI3G45590
N
0.793
GRMZM5G885700
Zea mays
GRMZM5G885700
N
0.804
LPERR02G16200
Leersia perrieri
LPERR02G16200
N
0.798
OBART02G20190
Oryza barthii
OBART02G20190
N
0.808
OGLUM02G20510
Oryza glumaepatula
OGLUM02G20510
N
0.808
OLONG_002405
Oryza longistaminata
OLONG_002405
N
0.808
OMERI02G19990
Oryza meridionalis
OMERI02G19990
N
0.808
ONIVA02G22300
Oryza nivara
ONIVA02G22300
N
0.808
OPUNC02G18120
Oryza punctata
OPUNC02G18120
N
0.808
ORGLA02G0173200
Oryza glaberrima
ORGLA02G0173200
N
0.808
ORUFI02G21320
Oryza rufipogon
ORUFI02G21320
N
0.808
OS02G0551900
Oryza sativa
OS02G0551900
N
0.808
Traes_6DL_F47CFC6D9
Triticum aestivum
Traes_6DL_F47CFC6D9
N
0.827