VIT_06s0004g01870 (Vitis vinifera)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 VIT_06s0004g01870 T131455_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_06s0004g01870.t01 C2H2 ZF 256 277
VIT_06s0004g01870.t01 C2H2 ZF 278 305

Links

Other C2H2 ZF family TFs
Other Vitis vinifera TFs

155 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00022p00243980 Amborella trichopoda AMTR_s00022p00243980 N 0.797
AMTR_s00093p00164790 Amborella trichopoda AMTR_s00093p00164790 N 0.763
WIP6 Arabidopsis thaliana AT1G13290 N 0.763
WIP2 Arabidopsis thaliana AT3G57670 N 0.797
BGIOSGA023262 Oryza indica BGIOSGA023262 N 0.817
BGIOSGA030081 Oryza indica BGIOSGA030081 N 0.756
Bo4g111000 Brassica oleracea Bo4g111000 N 0.797
Bo5g015200 Brassica oleracea Bo5g015200 N 0.763
Bo6g073120 Brassica oleracea Bo6g073120 N 0.797
Bo8g092070 Brassica oleracea Bo8g092070 N 0.797
Bra003295 Brassica rapa Bra003295 N 0.797
Bra007346 Brassica rapa Bra007346 N 0.795
Bra014612 Brassica rapa Bra014612 N 0.797
Bra019822 Brassica rapa Bra019822 N 0.763
BRADI1G36067 Brachypodium distachyon BRADI1G36067 N 0.817
NTT Arabidopsis lyrata fgenesh2_kg.5__2209__AT3G57670.1 N 0.797
GLYMA01G22120 Glycine max GLYMA01G22120 N 0.763
GLYMA02G10970 Glycine max GLYMA02G10970 N 0.763
GLYMA02G31270 Glycine max GLYMA02G31270 N 0.797
GLYMA08G16390 Glycine max GLYMA08G16390 N 0.767
GLYMA10G34770 Glycine max GLYMA10G34770 N 0.763
GLYMA12G36660 Glycine max GLYMA12G36660 N 0.767
GLYMA13G27371 Glycine max GLYMA13G27371 N 0.767
GLYMA15G42870 Glycine max GLYMA15G42870 N 0.767
GLYMA19G32430 Glycine max GLYMA19G32430 N 0.797
GLYMA20G32750 Glycine max GLYMA20G32750 N 0.763
GRMZM2G061545 Zea mays GRMZM2G061545 N 0.793
GRMZM2G435357 Zea mays GRMZM2G435357 N 0.817
GRMZM2G436344 Zea mays GRMZM2G436344 N 0.817
GSMUA_Achr3G03850_001 Musa acuminata GSMUA_Achr3G03850_001 N 0.767
GSMUA_Achr3G11050_001 Musa acuminata GSMUA_Achr3G11050_001 N 0.788
GSMUA_Achr3G11870_001 Musa acuminata GSMUA_Achr3G11870_001 N 0.787
GSMUA_Achr4G01560_001 Musa acuminata GSMUA_Achr4G01560_001 N 0.758
GSMUA_Achr6G03470_001 Musa acuminata GSMUA_Achr6G03470_001 N 0.764
GSMUA_Achr9G12600_001 Musa acuminata GSMUA_Achr9G12600_001 N 0.767
GSMUA_AchrUn_randomG20320_001 Musa acuminata GSMUA_AchrUn_randomG20320_001 N 0.797
GSMUA_AchrUn_randomG22660_001 Musa acuminata GSMUA_AchrUn_randomG22660_001 N 0.797
LPERR06G17470 Leersia perrieri LPERR06G17470 N 0.817
MLOC_65351 Hordeum vulgare MLOC_65351 N 0.817
MTR_1g093095 Medicago truncatula MTR_1g093095 N 0.763
OB06G28740 Oryza brachyantha OB06G28740 N 0.817
OBART06G20890 Oryza barthii OBART06G20890 N 0.793
OBART09G03640 Oryza barthii OBART09G03640 N 0.756
OGLUM06G22000 Oryza glumaepatula OGLUM06G22000 N 0.817
OGLUM09G04400 Oryza glumaepatula OGLUM09G04400 N 0.756
OMERI09G02890 Oryza meridionalis OMERI09G02890 N 0.756
ONIVA02G14580 Oryza nivara ONIVA02G14580 N 0.756
ONIVA06G24670 Oryza nivara ONIVA06G24670 N 0.817
OPUNC06G19020 Oryza punctata OPUNC06G19020 N 0.817
OPUNC09G03280 Oryza punctata OPUNC09G03280 N 0.756
ORGLA06G0173600 Oryza glaberrima ORGLA06G0173600 N 0.817
ORGLA09G0176200 Oryza glaberrima ORGLA09G0176200 N 0.756
ORUFI06G22350 Oryza rufipogon ORUFI06G22350 N 0.817
ORUFI09G04060 Oryza rufipogon ORUFI09G04060 N 0.756
OS02G0196100 Oryza sativa OS02G0196100 N 0.767
OS06G0612300 Oryza sativa OS06G0612300 N 0.817
PGSC0003DMG400006808 Solanum tuberosum PGSC0003DMG400006808 N 0.758
PGSC0003DMG400013609 Solanum tuberosum PGSC0003DMG400013609 N 0.797
PGSC0003DMG400030271 Solanum tuberosum PGSC0003DMG400030271 N 0.797
PGSC0003DMG400046144 Solanum tuberosum PGSC0003DMG400046144 N 0.773
POPTR_0001s27490 Populus trichocarpa POPTR_0001s27490 N 0.767
POPTR_0003s20400 Populus trichocarpa POPTR_0003s20400 N 0.788
POPTR_0009s06700 Populus trichocarpa POPTR_0009s06700 N 0.767
POPTR_0010s13910 Populus trichocarpa POPTR_0010s13910 N 0.763
POPTR_0016s05310 Populus trichocarpa POPTR_0016s05310 N 0.797
PRUPE_ppa008185mg Prunus persica PRUPE_ppa008185mg N 0.797
PRUPE_ppa020013m2g Prunus persica PRUPE_ppa020013m2g N 0.763
PRUPE_ppa024429mg Prunus persica PRUPE_ppa024429mg N 0.797
Sb10g024040 Sorghum bicolor Sb10g024040 N 0.817
SELMODRAFT_110681 Selaginella moellendorffii SELMODRAFT_110681 N 0.787
SELMODRAFT_128378 Selaginella moellendorffii SELMODRAFT_128378 N 0.787
SELMODRAFT_36986 Selaginella moellendorffii SELMODRAFT_36986 N 0.763
SELMODRAFT_36987 Selaginella moellendorffii SELMODRAFT_36987 N 0.763
SELMODRAFT_57106 Selaginella moellendorffii SELMODRAFT_57106 N 0.763
SELMODRAFT_57114 Selaginella moellendorffii SELMODRAFT_57114 N 0.763
Si006616m.g Setaria italica Si006616m.g N 0.817
Solyc01g087050.2 Solanum lycopersicum Solyc01g087050.2 N 0.758
Solyc05g009770.1 Solanum lycopersicum Solyc05g009770.1 N 0.773
Solyc11g062060.1 Solanum lycopersicum Solyc11g062060.1 N 0.797
TCM_005892 Theobroma cacao TCM_005892 N 0.767
TCM_011858 Theobroma cacao TCM_011858 N 0.763
TCM_024788 Theobroma cacao TCM_024788 N 0.797
TCM_040610 Theobroma cacao TCM_040610 N 0.787
Traes_7AL_1070DBD71 Triticum aestivum Traes_7AL_1070DBD71 N 0.793
TRIUR3_23735 Triticum urartu TRIUR3_23735 N 0.793
DOT5 Vitis vinifera VIT_01s0011g03100 N 0.763
NTT Vitis vinifera VIT_08s0007g08070 N 0.797
TT1 Vitis vinifera VIT_18s0001g05860 N 0.760
Ca_07269 Cicer arietinum Ca_07269 N 0.797
Ca_08435 Cicer arietinum Ca_08435 N 0.763
Ca_21713 Cicer arietinum Ca_21713 N 0.787
Ca_24699 Cicer arietinum Ca_24699 N 0.763
Cla002714 Citrullus lanatus Cla002714 N 0.763
Cla008187 Citrullus lanatus Cla008187 N 0.797
Cla008675 Citrullus lanatus Cla008675 N 0.773
Pm000471 Prunus mume Pm000471 N 0.797
Pm025853 Prunus mume Pm025853 N 0.797
Pm029018 Prunus mume Pm029018 N 0.763
27810.m000651 Ricinus communis 27810.m000651 N 0.797
30061.m000294 Ricinus communis 30061.m000294 N 0.767
30169.m006417 Ricinus communis 30169.m006417 N 0.788
cassava34009.m1 Manihot esculenta cassava34009.m1 N 0.782
cassava35956.valid.m1 Manihot esculenta cassava35956.valid.m1 N 0.797
cassava39829.m1 Manihot esculenta cassava39829.m1 N 0.767
cassava41737.m1 Manihot esculenta cassava41737.m1 N 0.797
cassava46219.m1 Manihot esculenta cassava46219.m1 N 0.763
cassava5227.m1 Manihot esculenta cassava5227.m1 N 0.788
Cucsa.242970 Cucumis sativus Cucsa.242970 N 0.797
Cucsa.248320 Cucumis sativus Cucsa.248320 N 0.763
Cucsa.357260 Cucumis sativus Cucsa.357260 N 0.797
e_gw1.203.23.1 Physcomitrella patens e_gw1.203.23.1 N 0.787
gw1.359.34.1 Physcomitrella patens gw1.359.34.1 N 0.787
mgf019910m Mimulus guttatus mgf019910m N 0.773
Aquca_026_00228 Aquilegia coerulea Aquca_026_00228 N 0.763
Bostr.13671s0117 Boechera stricta Bostr.13671s0117 N 0.763
Bostr.20903s0019 Boechera stricta Bostr.20903s0019 N 0.797
Cagra.0210s0004 Capsella grandiflora Cagra.0210s0004 N 0.797
Cagra.3501s0170 Capsella grandiflora Cagra.3501s0170 N 0.763
Carubv10012013m.g Capsella rubella Carubv10012013m.g N 0.763
Carubv10017428m.g Capsella rubella Carubv10017428m.g N 0.797
Ciclev10005189m.g Citrus clementina Ciclev10005189m.g N 0.797
Ciclev10017716m.g Citrus clementina Ciclev10017716m.g N 0.797
Eucgr.A02400 Eucalyptus grandis Eucgr.A02400 N 0.797
Eucgr.B03047 Eucalyptus grandis Eucgr.B03047 N 0.763
Eucgr.J00788 Eucalyptus grandis Eucgr.J00788 N 0.787
evm.TU.supercontig_1.215 Carica papaya evm.TU.supercontig_1.215 N 0.763
evm.TU.supercontig_84.74 Carica papaya evm.TU.supercontig_84.74 N 0.797
gene14361-v1.0-hybrid Fragaria vesca gene14361-v1.0-hybrid N 0.797
gene20598-v1.0-hybrid Fragaria vesca gene20598-v1.0-hybrid N 0.797
Gorai.002G152600 Gossypium raimondii Gorai.002G152600 N 0.797
Gorai.003G089200 Gossypium raimondii Gorai.003G089200 N 0.797
Gorai.006G138700 Gossypium raimondii Gorai.006G138700 N 0.797
Gorai.013G080100 Gossypium raimondii Gorai.013G080100 N 0.763
Gorai.013G250800 Gossypium raimondii Gorai.013G250800 N 0.787
Lus10021700.g Linum usitatissimum Lus10021700.g N 0.763
Lus10029525.g Linum usitatissimum Lus10029525.g N 0.758
Lus10031271.g Linum usitatissimum Lus10031271.g N 0.778
Lus10031838.g Linum usitatissimum Lus10031838.g N 0.778
Lus10035044.g Linum usitatissimum Lus10035044.g N 0.763
Lus10039613.g Linum usitatissimum Lus10039613.g N 0.758
MDP0000144266 Malus domestica MDP0000144266 N 0.756
MDP0000303483 Malus domestica MDP0000303483 N 0.763
MDP0000403797 Malus domestica MDP0000403797 N 0.797
MDP0000580545 Malus domestica MDP0000580545 N 0.797
MDP0000601705 Malus domestica MDP0000601705 N 0.797
orange1.1g019587m.g Citrus sinensis orange1.1g019587m.g N 0.797
orange1.1g040794m.g Citrus sinensis orange1.1g040794m.g N 0.797
Pavir.Db00765 Panicum virgatum Pavir.Db00765 N 0.817
SapurV1A.0009s0540 Salix purpurea SapurV1A.0009s0540 N 0.788
SapurV1A.0018s0090 Salix purpurea SapurV1A.0018s0090 N 0.797
Thhalv10006035m.g Eutrema salsugineum Thhalv10006035m.g N 0.797
Thhalv10009489m.g Eutrema salsugineum Thhalv10009489m.g N 0.763
PK03705.1 Cannabis sativa PK03705.1 N 0.797
chr1.CM0318.720.nd Lotus japonicus chr1.CM0318.720.nd N 0.797
chr2.CM1731.90.nc Lotus japonicus chr2.CM1731.90.nc N 0.763