YQE_07567 (Dendroctonus ponderosae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 YQE_07567 T132001_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gl
M03671_2.00 		Drosophila melanogaster
RTTACCATACAAGTGCAV
BTGCACTTGTATGGTAAY		 SELEX
Nitta et al.(2015)
gl_1 		0.797 0.912
gl
M06078_2.00 		Drosophila melanogaster
DAYNCWTBAAAT
ATTTVAWGNRTH		 B1H
Zhu et al.(2011)
gl_FlyReg_FBgn0004618 		0.797 0.912
gl
M06079_2.00 		Drosophila melanogaster
TTRTABGGYTTC
GAARCCVTAYAA		 B1H
Zhu et al.(2011)
gl_SANGER_5_FBgn0004618 		0.797 0.912
gl
M06080_2.00 		Drosophila melanogaster
NNBDWNTADGGCTTC
GAAGCCHTANWHVNN		 B1H
Zhu et al.(2011)
gl_SOLEXA_5_FBgn0004618 		0.797 0.912
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENN75837 C2H2 ZF 261 282
ENN75837 C2H2 ZF 288 310
ENN75837 C2H2 ZF 316 338
ENN75837 C2H2 ZF 344 366
ENN75837 C2H2 ZF 372 394

Links

Other C2H2 ZF family TFs
Other Dendroctonus ponderosae TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.23794s0621 Boechera stricta Bostr.23794s0621 N
ORGLA12G0114800 Oryza glaberrima ORGLA12G0114800 N
ORUFI12G13970 Oryza rufipogon ORUFI12G13970 N
PRUPE_ppa017597mg Prunus persica PRUPE_ppa017597mg N
Si038598m.g Setaria italica Si038598m.g N
Traes_5BL_B55F708EC Triticum aestivum Traes_5BL_B55F708EC N
Traes_5DL_84C86F76D Triticum aestivum Traes_5DL_84C86F76D N
Pm010610 Prunus mume Pm010610 N
Bostr.15697s0367 Boechera stricta Bostr.15697s0367 N
OPUNC12G11490 Oryza punctata OPUNC12G11490 N
Cagra.1508s0136 Capsella grandiflora Cagra.1508s0136 N
Carubv10011063m.g Capsella rubella Carubv10011063m.g N
Ciclev10017579m.g Citrus clementina Ciclev10017579m.g N
Lus10005451.g Linum usitatissimum Lus10005451.g N
Lus10038432.g Linum usitatissimum Lus10038432.g N
orange1.1g041370m.g Citrus sinensis orange1.1g041370m.g N
Thhalv10017751m.g Eutrema salsugineum Thhalv10017751m.g N
Al_scaffold_0004_1965 Arabidopsis lyrata Al_scaffold_0004_1965 N
ONIVA12G13030 Oryza nivara ONIVA12G13030 N
OGLUM12G14400 Oryza glumaepatula OGLUM12G14400 N
OB12G20560 Oryza brachyantha OB12G20560 N
fgenesh1_pm.C_scaffold_1002485 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002485 N
F775_52642 Aegilops tauschii F775_52642 N
BRADI4G29370 Brachypodium distachyon BRADI4G29370 N
Bra022993 Brassica rapa Bra022993 N
Bra021933 Brassica rapa Bra021933 N
Bra005389 Brassica rapa Bra005389 N
Bo4g182930 Brassica oleracea Bo4g182930 N
Bo4g039270 Brassica oleracea Bo4g039270 N
Bo3g028090 Brassica oleracea Bo3g028090 N
BGIOSGA037431 Oryza indica BGIOSGA037431 N
BHLH53 Arabidopsis thaliana AT2G34820 N
BHLH52 Arabidopsis thaliana AT1G30670 N