CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG018454.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG018454.1
T133402_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG018454.1
C2H2 ZF
62
86
FKCEFDGCDRKFANSSDRKKHSHVH
Alligator_sinensis_CCG018454.1
C2H2 ZF
92
116
YYCKVRGCDKSYTHPSSLRKHMKIH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
wor
Drosophila melanogaster
FBgn0001983
D
esg
Drosophila melanogaster
FBgn0001981
D
L798_10614
Zootermopsis nevadensis
L798_10614
I
SINV14155
Solenopsis invicta
SINV14155
I
RPRC005707
Rhodnius prolixus
RPRC005707
I
PHUM091060
Pediculus humanus
PHUM091060
I
NV17743
Nasonia vitripennis
NV17743
I
MCINX001355
Melitaea cinxia
MCINX001355
I
LotgiG114290
Lottia gigantea
LotgiG114290
I
GJ23203
Drosophila virilis
FBgn0210305
I
KGM_17970
Danaus plexippus
KGM_17970
I
HMEL002306
Heliconius melpomene
HMEL002306
I
GE20968
Drosophila yakuba
FBgn0238253
I
GE19402
Drosophila yakuba
FBgn0236745
I
GK18253
Drosophila willistoni
FBgn0220252
I
GK18133
Drosophila willistoni
FBgn0220132
I
GD24004
Drosophila simulans
FBgn0195364
I
SMAR001314
Strigamia maritima
SMAR001314
I
SMAR001730
Strigamia maritima
SMAR001730
I
TC014474
Tribolium castaneum
TC014474
I
YQE_07640
Dendroctonus ponderosae
YQE_07640
I
Cflo_07707--XP_393944.1_APIME
Camponotus floridanus
Cflo_07707--XP_393944.1_APIME
I
estExt_fgenesh2_kg.C_190001
Branchiostoma floridae
estExt_fgenesh2_kg.C_190001
I
CLEC007039
Cimex lectularius
CLEC007039
I
HHAL006775-PA
Halyomorpha halys
HHAL006775-PA
I
LCUP006862
Lucilia cuprina
LCUP006862
I
LCUP013268
Lucilia cuprina
LCUP013268
I
LDEC001157
Leptinotarsa decemlineata
LDEC001157
I
MDOA006149
Musca domestica
MDOA006149
I
MDOA014024
Musca domestica
MDOA014024
I
PPAI008011
Phlebotomus papatasi
PPAI008011
I
GA17666
Drosophila pseudoobscura
FBgn0077676
I
BGIBMGA006230
Bombyx mori
BGIBMGA006230
I
CapteG76255
Capitella teleta
CapteG76255
I
CGI_10027813
Crassostrea gigas
CGI_10027813
I
snai2
Danio rerio
ENSDARG00000040046
I
snai2
Gasterosteus aculeatus
ENSGACG00000017935
I
ENSGMOG00000002669
Gadus morhua
ENSGMOG00000002669
I
ENSLOCG00000005992
Lepisosteus oculatus
ENSLOCG00000005992
I
ENSONIG00000009542
Oreochromis niloticus
ENSONIG00000009542
I
snai2
Oryzias latipes
ENSORLG00000017475
I
ENSPFOG00000014336
Poecilia formosa
ENSPFOG00000014336
I
snai2
Tetraodon nigroviridis
ENSTNIG00000008504
I
snai2
Takifugu rubripes
ENSTRUG00000006860
I
ENSXMAG00000019030
Xiphophorus maculatus
ENSXMAG00000019030
I
GJ17399
Drosophila virilis
FBgn0204571
I
GA17994
Drosophila pseudoobscura
FBgn0078003
I
GF14525
Drosophila ananassae
FBgn0091552
I
GF15382
Drosophila ananassae
FBgn0092407
I
GG24207
Drosophila erecta
FBgn0116339
I
GG25158
Drosophila erecta
FBgn0117283
I
GH13119
Drosophila grimshawi
FBgn0120596
I
GH13754
Drosophila grimshawi
FBgn0121230
I
GI17894
Drosophila mojavensis
FBgn0140635
I
GL26425
Drosophila persimilis
FBgn0164007
I
GL26594
Drosophila persimilis
FBgn0164176
I
GM14357
Drosophila sechellia
FBgn0169282
I
GD21956
Drosophila simulans
FBgn0193371
I
ACEP13085
Atta cephalotes
ACEP13085
I