Cmyd_10005916 (Chelonia mydas)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cmyd_10005916 T134287_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF653
M08248_2.00 		Homo sapiens
NWTTHNYDHCYKCCGACWNHWAWD
HWTWDNWGTCGGMRGDHRNDAAWN		 ChIP-seq
Najafabadi et al.(2015b)
ZNF653 		0.811 0.965
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10005916 C2H2 ZF 355 380
Cmyd_10005916 C2H2 ZF 386 410
Cmyd_10005916 C2H2 ZF 416 438
Cmyd_10005916 C2H2 ZF 444 466
Cmyd_10005916 C2H2 ZF 474 497

Links

Other C2H2 ZF family TFs
Other Chelonia mydas TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF653 Homo sapiens ENSG00000161914 D 0.811
Zfp653 Rattus norvegicus ENSRNOG00000014065 I 0.811
ENSONIG00000008038 Oreochromis niloticus ENSONIG00000008038 I 0.784
znf653 Oryzias latipes ENSORLG00000016563 I 0.784
ENSPANG00000016446 Papio anubis ENSPANG00000016446 I 0.811
ENSPFOG00000003530 Poecilia formosa ENSPFOG00000003530 I 0.784
ENSPPYG00000009584 Pongo abelii ENSPPYG00000009584 I 0.811
ZNF653 Pan troglodytes ENSPTRG00000010507 I 0.811
ZNF653 Pteropus vampyrus ENSPVAG00000014895 I 0.813
ZNF653 Otolemur garnettii ENSOGAG00000007074 I 0.813
ZNF653 Sus scrofa ENSSSCG00000013616 I 0.813
ENSSTOG00000003640 Ictidomys tridecemlineatus ENSSTOG00000003640 I 0.767
ZNF653 Tursiops truncatus ENSTTRG00000001794 I 0.813
Alligator_sinensis_CCG017936.1 Alligator sinensis Alligator_sinensis_CCG017936.1 I 0.803
ENSMMUP00000027145 Macaca fascicularis ENSMMUP00000027145 I 0.803
Myotis_brandtii_Znf653_10003855 Myotis brandtii Myotis_brandtii_Znf653_10003855 I 0.813
Ogr06398 Ophisaurus gracilis Ogr06398 I 0.815
Pvit_14576 Pogona vitticeps Pvit_14576 I 0.815
ENSACAG00000016965 Anolis carolinensis ENSACAG00000016965 I 0.815
ENSOANG00000012102 Ornithorhynchus anatinus ENSOANG00000012102 I 0.827
ENSNLEG00000012591 Nomascus leucogenys ENSNLEG00000012591 I 0.811
Zfp653 Mus musculus ENSMUSG00000038895 I 0.811
ENSMPUG00000005002 Mustela putorius furo ENSMPUG00000005002 I 0.813
ZNF653 Macaca mulatta ENSMMUG00000020617 I 0.811
ZNF653 Myotis lucifugus ENSMLUG00000016337 I 0.813
ZNF653 Felis catus ENSFCAG00000004922 I 0.813
znf653 Danio rerio ENSDARG00000093469 I 0.782
ENSCSAG00000006753 Chlorocebus sabaeus ENSCSAG00000006753 I 0.811
ZNF653 Cavia porcellus ENSCPOG00000010842 I 0.813
ZNF653 Callithrix jacchus ENSCJAG00000005551 I 0.811
ZNF653 Canis familiaris ENSCAFG00000031712 I 0.813
ZNF653 Bos taurus ENSBTAG00000014415 I 0.813
ENSAMXG00000005448 Astyanax mexicanus ENSAMXG00000005448 I 0.786
ENSAMEG00000010478 Ailuropoda melanoleuca ENSAMEG00000010478 I 0.813