CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gfo_R005319
(
Geospiza fortis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Gfo_R005319
T135720_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gfo_R005319
C2H2 ZF
79
103
YNCPQLHCGKAFASKYKLYRHMATH
Gfo_R005319
C2H2 ZF
109
131
HQCMYCEKMFHRKDHLRNHLQTH
Gfo_R005319
C2H2 ZF
138
160
LHCPECGKNYNTKLGFRRHLAMH
Gfo_R005319
C2H2 ZF
202
224
HPCDHCDRRFYTRKDVRRHLVVH
Gfo_R005319
C2H2 ZF
230
253
FLCQYCAQRFGRKDHLTRHMKKSH
Links
Other
C2H2 ZF
family TFs
Other
Geospiza fortis
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AFAF017710
Anopheles farauti
AFAF017710
N
KGM_10424
Danaus plexippus
KGM_10424
N
AARA002486
Anopheles arabiensis
AARA002486
N
AARA005758
Anopheles arabiensis
AARA005758
N
AATE015678
Anopheles atroparvus
AATE015678
N
ACHR004018
Anopheles christyi
ACHR004018
N
ACOM038889
Anopheles coluzzii
ACOM038889
N
ADIR006881
Anopheles dirus
ADIR006881
N
AEPI006428
Anopheles epiroticus
AEPI006428
N
HMEL015309
Heliconius melpomene
HMEL015309
N
AFUN004869
Anopheles funestus
AFUN004869
N
AMEC008000
Anopheles melas
AMEC008000
N
AMIN010190
Anopheles minimus
AMIN010190
N
AQUA011221
Anopheles quadriannulatus
AQUA011221
N
ASTEI02235
Anopheles stephensi
ASTEI02235
N
LLOJ008378
Lutzomyia longipalpis
LLOJ008378
N
MDOA012898
Musca domestica
MDOA012898
N
CpipJ_CPIJ008535
Culex pipiens
CpipJ_CPIJ008535
N
GE19874
Drosophila yakuba
FBgn0237204
N
GK16809
Drosophila willistoni
FBgn0218809
N
GJ13199
Drosophila virilis
FBgn0200425
N
GD14664
Drosophila simulans
FBgn0186342
N
GM25657
Drosophila sechellia
FBgn0180514
N
GI13370
Drosophila mojavensis
FBgn0136127
N
GH16224
Drosophila grimshawi
FBgn0123695
N
GG13577
Drosophila erecta
FBgn0105847
N
GF23931
Drosophila ananassae
FBgn0100925
N
GA21978
Drosophila pseudoobscura
FBgn0081963
N
CG9705
Drosophila melanogaster
FBgn0036661
N
CPIJ008535
Culex quinquefasciatus
CPIJ008535
N
AGAP005641
Anopheles gambiae
AGAP005641
N
ADAC007661
Anopheles darlingi
ADAC007661
N
AAEL009235
Aedes aegypti
AAEL009235
N