e_gw1.1.4254.1 (Mycosphaerella graminicola)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 e_gw1.1.4254.1 T137997_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU03184
M01474_2.00 		Neurospora crassa
NDNNVATCNN
NNGATBNNHN		 PBM
Najafabadi et al.(2015a)
pTH10252 		0.792 0.913
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.1.4254.1 C2H2 ZF 32 54
e_gw1.1.4254.1 C2H2 ZF 60 85

Links

Other C2H2 ZF family TFs
Other Mycosphaerella graminicola TFs

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.010G033500 Gossypium raimondii Gorai.010G033500 N
cassava1724.valid.m1 Manihot esculenta cassava1724.valid.m1 N
cassava249.valid.m1 Manihot esculenta cassava249.valid.m1 N
Ciclev10002056m.g Citrus clementina Ciclev10002056m.g N
Eucgr.F02157 Eucalyptus grandis Eucgr.F02157 N
evm.TU.supercontig_3189.1 Carica papaya evm.TU.supercontig_3189.1 N
gene26537-v1.0-hybrid Fragaria vesca gene26537-v1.0-hybrid N
Gorai.005G097100 Gossypium raimondii Gorai.005G097100 N
Gorai.009G279200 Gossypium raimondii Gorai.009G279200 N
29596.m000720 Ricinus communis 29596.m000720 N
MDP0000303048 Malus domestica MDP0000303048 N
orange1.1g022924m.g Citrus sinensis orange1.1g022924m.g N
SapurV1A.0004s0630 Salix purpurea SapurV1A.0004s0630 N
SapurV1A.0320s0100 Salix purpurea SapurV1A.0320s0100 N
PK04210.1 Cannabis sativa PK04210.1 N
chr1.CM0289.360.nc Lotus japonicus chr1.CM0289.360.nc N
LjT45A20.70.nd Lotus japonicus LjT45A20.70.nd N
PDK_20s1363101g001 Phoenix dactylifera PDK_20s1363101g001 N
PRUPE_ppa009340mg Prunus persica PRUPE_ppa009340mg N
GLYMA02G37980 Glycine max GLYMA02G37980 N
GLYMA06G10280 Glycine max GLYMA06G10280 N
GLYMA14G36150 Glycine max GLYMA14G36150 N
GSMUA_Achr10G07970_001 Musa acuminata GSMUA_Achr10G07970_001 N
MTR_5g066510 Medicago truncatula MTR_5g066510 N
PGSC0003DMG400033576 Solanum tuberosum PGSC0003DMG400033576 N
POPTR_0002s11150 Populus trichocarpa POPTR_0002s11150 N
POPTR_0005s19580 Populus trichocarpa POPTR_0005s19580 N
AMTR_s00019p00253580 Amborella trichopoda AMTR_s00019p00253580 N
Solyc01g106030.2 Solanum lycopersicum Solyc01g106030.2 N
Solyc10g047640.1 Solanum lycopersicum Solyc10g047640.1 N
TCM_034530 Theobroma cacao TCM_034530 N
VIT_03s0038g00480 Vitis vinifera VIT_03s0038g00480 N
TIFY1 Vitis vinifera VIT_18s0001g07720 N
Ca_14968 Cicer arietinum Ca_14968 N
Pm004390 Prunus mume Pm004390 N