CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1Plus.C_sca_11_chr8_3_00004
(
Nectria haematococca
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_Genewise1Plus.C_sca_11_chr8_3_00004
T138889_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1Plus.C_sca_11_chr8_3_00004
C2H2 ZF
471
496
YTCTYHGCTLRFETPALLQKHKREGH
estExt_Genewise1Plus.C_sca_11_chr8_3_00004
C2H2 ZF
537
555
CNTIFSRPYDLTRHEDTIH
estExt_Genewise1Plus.C_sca_11_chr8_3_00004
C2H2 ZF
562
587
VRCDLCTEEKTFSRADALTRHYRVCH
Links
Other
C2H2 ZF
family TFs
Other
Nectria haematococca
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HMPREF1624_08493
Sporothrix schenckii
HMPREF1624_08493
N
0.823
estExt_fgenesh1_pg.C_20667
Cryphonectria parasitica
estExt_fgenesh1_pg.C_20667
N
0.823
VHEMI04457
Torrubiella hemipterigena
VHEMI04457
N
0.825
UCRPA7_7490
Togninia minima
UCRPA7_7490
N
0.827
THITE_2124226
Thielavia terrestris
THITE_2124226
N
0.813
SPBR_03635
Sporothrix brasiliensis
SPBR_03635
N
0.823
S40288_06333
Stachybotrys chartarum
S40288_06333
N
0.827
S40285_07194
Stachybotrys chlorohalonata
S40285_07194
N
0.827
PODANS_6_5270
Podospora anserina
PODANS_6_5270
N
0.823
NechaG71246
Fusarium solani
NechaG71246
N
0.827
MYCTH_2312477
Myceliophthora thermophila
MYCTH_2312477
N
0.821
ACRE_023080
Acremonium chrysogenum
ACRE_023080
N
0.827
GLRG_08744
Colletotrichum graminicola
GLRG_08744
N
0.823
FVEG_11376
Fusarium verticillioides
FVEG_11376
N
0.827
FOXG_13954
Fusarium oxysporum
FOXG_13954
N
0.827
FFUJ_09747
Fusarium fujikuroi
FFUJ_09747
N
0.827
CTHT_0008850
Chaetomium thermophilum
CTHT_0008850
N
0.811
CSUB01_11633
Colletotrichum sublineola
CSUB01_11633
N
0.823
CMQ_4400
Grosmannia clavigera
CMQ_4400
N
0.824
CHGG_10305
Chaetomium globosum
CHGG_10305
N
0.817
CH063_03819
Colletotrichum higginsianum
CH063_03819
N
0.823
CFIO01_03141
Colletotrichum fioriniae
CFIO01_03141
N
0.823