CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22008649m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22008649m.g
T140698_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22008649m.p
C2H2 ZF
459
481
YECNVCYKTFGQLSNLKVHLRTH
Ocbimv22008649m.p
C2H2 ZF
487
509
FVCQTCGKGFTQLAHLQKHHLVH
Ocbimv22008649m.p
C2H2 ZF
515
537
HECQSCGKRFSSTSNLKTHMRLH
Ocbimv22008649m.p
C2H2 ZF
543
565
FQCKLCPSKFTQFVHLKLHKRLH
Ocbimv22008649m.p
C2H2 ZF
571
592
YECPNCNRKYISPSGLKTHWKA
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CapteG226252
Capitella teleta
CapteG226252
I
0.766
CGI_10024223
Crassostrea gigas
CGI_10024223
I
0.795
LotgiG86198
Lottia gigantea
LotgiG86198
I
0.795
TC014741
Tribolium castaneum
TC014741
I
0.756
LDEC016433
Leptinotarsa decemlineata
LDEC016433
I
0.756
ASU_05469
Ascaris suum
ASU_05469
I
0.759
DME_0000608401
Dracunculus medinensis
DME_0000608401
I
0.756
TCLT_0000472801
Thelazia callipaeda
TCLT_0000472801
I
0.756
TCNE_0001220201
Toxocara canis
TCNE_0001220201
I
0.756