Sakowv30043351m.g (Saccoglossus kowalevskii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Sakowv30043351m.g T142488_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
esg
M06050_2.00 		Drosophila melanogaster
CACCTGH
DCAGGTG		 B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981 		0.790 0.850
SNAI2
M00221_2.00 		Homo sapiens
HACYTGH
DCARGTD		 PBM
Barrera et al.(2016)
SNAI2_REF 		0.764 0.858
SNAI2
M02873_2.00 		Homo sapiens
VCACCTGYN
NRCAGGTGB		 SELEX
Jolma et al.(2013)
SNAI2_1 		0.764 0.858
SNAI2
M04392_2.00 		Homo sapiens
YGCACCTGYY
RRCAGGTGCR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_HT-SELEX 		0.764 0.858
SNAI2
M04394_2.00 		Homo sapiens
YRCACCTGYY
RRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_HT-SELEX 		0.764 0.858
SNAI2
M08853_2.00 		Homo sapiens
NVCACCTGYY
RRCAGGTGBN		 Misc
Kulakovskiy et al.(2013)
SNAI2_HUMAN.H11MO.0.A 		0.764 0.858
Snai2
M08973_2.00 		Mus musculus
VNRCACCTGYY
RRCAGGTGYNB		 Misc
Kulakovskiy et al.(2013)
SNAI2_MOUSE.H11MO.0.A 		0.764 0.858
SNAI2
M10102_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_01 		0.764 0.858
SNAI2
M10103_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_02 		0.764 0.858
SNAI2
M10104_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6 		0.764 0.858
SNAI2
M00220_2.00 		Homo sapiens
NHACCTGY
RCAGGTDN		 PBM
Barrera et al.(2016)
SNAI2_D119E 		0.764 0.858
SNAI2
M04393_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_Methyl-HT-SELEX 		0.764 0.858
SNAI2
M04395_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_Methyl-HT-SELEX 		0.764 0.858
SNAI2
M00222_2.00 		Homo sapiens
HACYTGHNNN
NNNDCARGTD		 PBM
Barrera et al.(2016)
SNAI2_T234I 		0.760 0.850
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23954104_peptide C2H2 ZF 145 167
23954104_peptide C2H2 ZF 176 198
23954104_peptide C2H2 ZF 202 224
23954104_peptide C2H2 ZF 230 252
23954104_peptide C2H2 ZF 258 278

Links

Other C2H2 ZF family TFs
Other Saccoglossus kowalevskii TFs

96 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Zfp362 Rattus norvegicus ENSRNOG00000043364 N
ENSMPUG00000015089 Mustela putorius furo ENSMPUG00000015089 N
Zfp362 Mus musculus ENSMUSG00000028799 N
ZNF362 Oryctolagus cuniculus ENSOCUG00000012456 N
ZNF362 Otolemur garnettii ENSOGAG00000007333 N
ENSONIG00000002181 Oreochromis niloticus ENSONIG00000002181 N
ENSONIG00000004076 Oreochromis niloticus ENSONIG00000004076 N
znf362b Oryzias latipes ENSORLG00000004688 N
ENSPANG00000010244 Papio anubis ENSPANG00000010244 N
ENSPFOG00000008905 Poecilia formosa ENSPFOG00000008905 N
ENSPFOG00000014429 Poecilia formosa ENSPFOG00000014429 N
ENSPPYG00000001575 Pongo abelii ENSPPYG00000001575 N
ZNF362 Pan troglodytes ENSPTRG00000000503 N
ZNF362 Pteropus vampyrus ENSPVAG00000015027 N
ZNF362 Monodelphis domestica ENSMODG00000017096 N
ENSSTOG00000020462 Ictidomys tridecemlineatus ENSSTOG00000020462 N
znf362b Tetraodon nigroviridis ENSTNIG00000019373 N
znf362b Takifugu rubripes ENSTRUG00000014263 N
ENSXMAG00000016683 Xiphophorus maculatus ENSXMAG00000016683 N
ENSXMAG00000017122 Xiphophorus maculatus ENSXMAG00000017122 N
Alligator_sinensis_CCG014295.1 Alligator sinensis Alligator_sinensis_CCG014295.1 N
Cmyd_10007696 Chelonia mydas Cmyd_10007696 N
ENSBTAP00000016763-D1 Bos grunniens ENSBTAP00000016763-D1 N
ENSP00000362527 Macaca fascicularis ENSP00000362527 N
Myotis_brandtii_ZNF362_10012408 Myotis brandtii Myotis_brandtii_ZNF362_10012408 N
Ogr07132 Ophisaurus gracilis Ogr07132 N
Pvit_10032 Pogona vitticeps Pvit_10032 N
znf362 Xenopus tropicalis XB-GENE-5793620 N
ENSFALG00000003819 Ficedula albicollis ENSFALG00000003819 N
ENSAMEG00000007291 Ailuropoda melanoleuca ENSAMEG00000007291 N
ENSAMXG00000003703 Astyanax mexicanus ENSAMXG00000003703 N
ENSAMXG00000015158 Astyanax mexicanus ENSAMXG00000015158 N
ZNF362 Bos taurus ENSBTAG00000012629 N
ZNF362 Canis familiaris ENSCAFG00000023543 N
ZNF362 Callithrix jacchus ENSCJAG00000001133 N
ZNF362 Cavia porcellus ENSCPOG00000021888 N
ENSCSAG00000001071 Chlorocebus sabaeus ENSCSAG00000001071 N
znf362a Danio rerio ENSDARG00000060900 N
znf362b Danio rerio ENSDARG00000062231 N
Zfp362 Dipodomys ordii ENSDORG00000012437 N
ZNF362 Equus caballus ENSECAG00000021304 N
ZNF362 Erinaceus europaeus ENSEEUG00000013897 N
ZNF362 Anolis carolinensis ENSACAG00000008279 N
ZNF362 Felis catus ENSFCAG00000029727 N
ZNF362 Homo sapiens ENSG00000160094 N
znf362b Gasterosteus aculeatus ENSGACG00000006798 N
ZNF362 Gallus gallus ENSGALG00000026558 N
ZNF362 Gorilla gorilla ENSGGOG00000001965 N
ENSGMOG00000016038 Gadus morhua ENSGMOG00000016038 N
ENSLACG00000004509 Latimeria chalumnae ENSLACG00000004509 N
ZNF362 Loxodonta africana ENSLAFG00000003524 N
ENSLOCG00000001262 Lepisosteus oculatus ENSLOCG00000001262 N
ENSMICG00000012475 Microcebus murinus ENSMICG00000012475 N
ZNF362 Myotis lucifugus ENSMLUG00000000806 N
ZNF362 Macaca mulatta ENSMMUG00000003267 N