CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_011_00361
(
Aquilegia coerulea
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Aquca_011_00361
T142537_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_011_00361.1
C2H2 ZF
1420
1443
YQCDLDGCTMGFSSKQELVLHKKN
Aquca_011_00361.1
C2H2 ZF
1444
1467
ICSVKGCGKKFFSHKYLVQHRRVH
Aquca_011_00361.1
C2H2 ZF
1503
1529
YVCREKGCGQTFRFVSDFSRHKRKTGH
Links
Other
C2H2 ZF
family TFs
Other
Aquilegia coerulea
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA06G18300
Glycine max
GLYMA06G18300
N
0.757
PGSC0003DMG400015167
Solanum tuberosum
PGSC0003DMG400015167
N
0.759
POPTR_0012s09390
Populus trichocarpa
POPTR_0012s09390
N
0.801
Solyc03g111590.2
Solanum lycopersicum
Solyc03g111590.2
N
0.759
TCM_014549
Theobroma cacao
TCM_014549
N
0.799
Ca_08787
Cicer arietinum
Ca_08787
N
0.767
Cucsa.391680
Cucumis sativus
Cucsa.391680
N
0.784
Ciclev10018473m.g
Citrus clementina
Ciclev10018473m.g
N
0.803
Eucgr.K02763
Eucalyptus grandis
Eucgr.K02763
N
0.759
evm.TU.supercontig_4.49
Carica papaya
evm.TU.supercontig_4.49
N
0.798
Gorai.006G270100
Gossypium raimondii
Gorai.006G270100
N
0.819