Bostr.10199s0147 (Boechera stricta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Bostr.10199s0147 T142564_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G22990
M06821_2.00 		Arabidopsis thaliana
WCGWHDTCGWYNHNN
NNDNRWCGAHDWCGW		 Dap-seq
OMalley et al.(2016)
AT5G22990_col_a 		0.827 0.957
AT2G15740
M06810_2.00 		Arabidopsis thaliana
WCGHHDYCGWY
RWCGRHDDCGW		 Dap-seq
OMalley et al.(2016)
AT2G15740_col_a 		0.825 0.913
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.10199s0147.1.p C2H2 ZF 233 256

Links

Other C2H2 ZF family TFs
Other Boechera stricta TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Stat1 Mus musculus ENSMUSG00000026104 D
STAT1 Homo sapiens ENSG00000115415 D
STAT1 Pteropus vampyrus ENSPVAG00000004735 I
ENSOARG00000013903 Ovis aries ENSOARG00000013903 I
STAT1 Oryctolagus cuniculus ENSOCUG00000002455 I
STAT1 Otolemur garnettii ENSOGAG00000003038 I
ENSONIG00000012194 Oreochromis niloticus ENSONIG00000012194 I
STAT1 Ochotona princeps ENSOPRG00000008589 I
ENSPANG00000017818 Papio anubis ENSPANG00000017818 I
ENSPMAG00000002770 Petromyzon marinus ENSPMAG00000002770 I
ENSPPYG00000013027 Pongo abelii ENSPPYG00000013027 I
ENSPSIG00000010185 Pelodiscus sinensis ENSPSIG00000010185 I
STAT1 Pan troglodytes ENSPTRG00000012749 I
stat1.L Xenopus laevis XB-GENE-864837 I
Stat1 Rattus norvegicus ENSRNOG00000014079 I
ENSSHAG00000016913 Sarcophilus harrisii ENSSHAG00000016913 I
STAT1 Sus scrofa ENSSSCG00000016057 I
ENSTNIG00000019687 Tetraodon nigroviridis ENSTNIG00000019687 I
STAT1 Tursiops truncatus ENSTTRG00000001134 I
ENSXMAG00000001594 Xiphophorus maculatus ENSXMAG00000001594 I
ENSBTAP00000010351-D1 Bos grunniens ENSBTAP00000010351-D1 I
stat1 Xenopus tropicalis XB-GENE-482166 I
ENSAPLG00000013226 Anas platyrhynchos ENSAPLG00000013226 I
STAT1 Gallus gallus ENSGALG00000007651 I
STAT1 Bos taurus ENSBTAG00000007867 I
ENSCAFG00000009797 Canis familiaris ENSCAFG00000009797 I
STAT1 Callithrix jacchus ENSCJAG00000005819 I
ENSCSAG00000012191 Chlorocebus sabaeus ENSCSAG00000012191 I
STAT1 Dasypus novemcinctus ENSDNOG00000007325 I
STAT1 Equus caballus ENSECAG00000009039 I
STAT1 Echinops telfairi ENSETEG00000017040 I
ENSFALG00000004349 Ficedula albicollis ENSFALG00000004349 I
STAT1 Felis catus ENSFCAG00000013725 I
ENSNLEG00000006694 Nomascus leucogenys ENSNLEG00000006694 I
STAT1 Gorilla gorilla ENSGGOG00000000611 I
ENSLACG00000006815 Latimeria chalumnae ENSLACG00000006815 I
STAT1 Loxodonta africana ENSLAFG00000001475 I
ENSLOCG00000009965 Lepisosteus oculatus ENSLOCG00000009965 I
STAT1 Meleagris gallopavo ENSMGAG00000006382 I
STAT1 Microcebus murinus ENSMICG00000002941 I
STAT1 Macaca mulatta ENSMMUG00000005613 I
STAT1 Monodelphis domestica ENSMODG00000011747 I
ENSMPUG00000012530 Mustela putorius furo ENSMPUG00000012530 I