Eucgr.K02292 (Eucalyptus grandis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Eucgr.K02292 T142874_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SGR5
M06805_2.00 		Arabidopsis thaliana
WTTTTGTCTTWTHYD
HRDAWAAGACAAAAW		 Dap-seq
OMalley et al.(2016)
SGR5_col_a 		0.818 0.977
SGR5
M06806_2.00 		Arabidopsis thaliana
WTTTGTCTYWWHBNN
NNVDWWRAGACAAAW		 Dap-seq
OMalley et al.(2016)
SGR5_colamp_a 		0.818 0.977
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.K02292.1 C2H2 ZF 142 163
Eucgr.K02292.1 C2H2 ZF 162 189

Links

Other C2H2 ZF family TFs
Other Eucalyptus grandis TFs

144 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF48 Callithrix jacchus ENSCJAG00000002611 I
ZNF48 Oryctolagus cuniculus ENSOCUG00000013651 N
Myotis_brandtii_ZNF48_10014474 Myotis brandtii Myotis_brandtii_ZNF48_10014474 N
ENSP00000417204 Macaca fascicularis ENSP00000417204 N
ENSBTAP00000028273-D1 Bos grunniens ENSBTAP00000028273-D1 N
ZNF48 Tursiops truncatus ENSTTRG00000017273 N
ENSSTOG00000021915 Ictidomys tridecemlineatus ENSSTOG00000021915 N
ZNF48 Sus scrofa ENSSSCG00000007801 N
Znf48 Rattus norvegicus ENSRNOG00000017837 N
ZNF48 Pan troglodytes ENSPTRG00000007999 N
ENSPPYG00000007271 Pongo abelii ENSPPYG00000007271 N
ZNF48 Procavia capensis ENSPCAG00000009103 N
ENSPANG00000016527 Papio anubis ENSPANG00000016527 N
ZNF48 Bos taurus ENSBTAG00000031806 N
ENSNLEG00000015834 Nomascus leucogenys ENSNLEG00000015834 N
Zfp553 Mus musculus ENSMUSG00000045598 N
ENSMPUG00000012333 Mustela putorius furo ENSMPUG00000012333 N
ZNF48 Macaca mulatta ENSMMUG00000029159 N
ZNF48 Loxodonta africana ENSLAFG00000008821 N
ZNF48 Homo sapiens ENSG00000180035 N
Zfp553 Dipodomys ordii ENSDORG00000013148 N
ENSCSAG00000006039 Chlorocebus sabaeus ENSCSAG00000006039 N
ZNF48 Cavia porcellus ENSCPOG00000001104 N
ZNF48 Canis familiaris ENSCAFG00000029852 N