PK17145.1 (Cannabis sativa)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 PK17145.1 T144906_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SGR5
M06805_2.00 		Arabidopsis thaliana
WTTTTGTCTTWTHYD
HRDAWAAGACAAAAW		 Dap-seq
OMalley et al.(2016)
SGR5_col_a 		0.783 0.907
SGR5
M06806_2.00 		Arabidopsis thaliana
WTTTGTCTYWWHBNN
NNVDWWRAGACAAAW		 Dap-seq
OMalley et al.(2016)
SGR5_colamp_a 		0.783 0.907
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK17145.1 C2H2 ZF 158 179
PK17145.1 C2H2 ZF 178 204

Links

Other C2H2 ZF family TFs
Other Cannabis sativa TFs

140 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_12811 Aegilops tauschii F775_12811 N
F775_18932 Aegilops tauschii F775_18932 N
F775_20452 Aegilops tauschii F775_20452 N
F775_31972 Aegilops tauschii F775_31972 N
Traes_1BS_566CEE7F6 Triticum aestivum Traes_1BS_566CEE7F6 N
Traes_5DS_9F4A5AE9F Triticum aestivum Traes_5DS_9F4A5AE9F N
Traes_6AS_2947CC609 Triticum aestivum Traes_6AS_2947CC609 N
Traes_6AS_B211B0425 Triticum aestivum Traes_6AS_B211B0425 N
Traes_6AS_F1919325C Triticum aestivum Traes_6AS_F1919325C N
Traes_6DS_F6C7E588F Triticum aestivum Traes_6DS_F6C7E588F N
TRIUR3_00257 Triticum urartu TRIUR3_00257 N
TRIUR3_00260 Triticum urartu TRIUR3_00260 N
TRIUR3_07926 Triticum urartu TRIUR3_07926 N