gli1.S (Xenopus laevis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 XB-GENE-864895 T145605_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GLI3
M04416_2.00 		Homo sapiens
VGACCACCCACVNHG
CDNBGTGGGTGGTCB		 SELEX
Yin et al.(2017)
GLI3_eDBD_HT-SELEX 		0.778 0.939
GLI3
M02642_2.00 		Homo sapiens
GACCACCCANK
MNTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI3 		0.778 0.939
GLI3
M08875_2.00 		Homo sapiens
VRACCACCCAV
BTGGGTGGTYB		 Misc
Kulakovskiy et al.(2013)
GLI3_HUMAN.H11MO.0.B 		0.778 0.939
GLI3
M10167_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI3_01 		0.778 0.939
GLI3
M10168_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI3_Q5_01 		0.778 0.939
GLI3
M04417_2.00 		Homo sapiens
CWHBGTGGGTGGTCY
RGACCACCCACVDWG		 SELEX
Yin et al.(2017)
GLI3_eDBD_Methyl-HT-SELEX 		0.778 0.939
Gli2
M01024_2.00 		Mus musculus
NGACCACCYN
NRGGTGGTCN		 PBM
Peterson et al.(2012)
Gli2 		0.761 0.922
GLI2
M02875_2.00 		Homo sapiens
GMCCACMCANVNHB
VDNBNTGKGTGGKC		 SELEX
Jolma et al.(2013)
GLI2_1 		0.761 0.922
GLI2
M02876_2.00 		Homo sapiens
GCGACCACVCWR
YWGBGTGGTCGC		 SELEX
Jolma et al.(2013)
GLI2_2 		0.761 0.922
GLI2
M02732_2.00 		Homo sapiens
GACCACMCAN
NTGKGTGGTC		 SELEX
Jolma et al.(2010)
GLI2_monomer 		0.761 0.922
GLI2
M04402_2.00 		Homo sapiens
VGACCACCCACVDHG
CDHBGTGGGTGGTCB		 SELEX
Yin et al.(2017)
GLI2_eDBD_HT-SELEX 		0.761 0.922
GLI2
M02641_2.00 		Homo sapiens
GACCACCCAHG
CDTGGGTGGTC		 SELEX
Hallikas et al.(2006)
GLI2 		0.761 0.922
GLI2
M10114_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI2_Q3 		0.761 0.922
GLI2
M10115_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GLI2_Q6 		0.761 0.922
GLI2
M04403_2.00 		Homo sapiens
RGACCACCCACVWWG
CWWBGTGGGTGGTCY		 SELEX
Yin et al.(2017)
GLI2_eDBD_Methyl-HT-SELEX 		0.761 0.922
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAC24946 C2H2 ZF 250 275
AAC24946 C2H2 ZF 283 310
AAC24946 C2H2 ZF 316 340
AAC24946 C2H2 ZF 346 371
AAC24946 C2H2 ZF 377 402

Links

Other C2H2 ZF family TFs
Other Xenopus laevis TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
xlr-1 Neurospora crassa NCU06971 D 0.000
SNOG_08740 Stagonospora nodorum SNOG_08740 I 0.000
VDBG_01258 Verticillium albo atrum VDBG_01258 I 0.000
A1O3_06596 Capronia epimyces A1O3_06596 I 0.000
A1O7_07897 Cladophialophora yegresii A1O7_07897 I 0.000
ACRE_046260 Acremonium chrysogenum ACRE_046260 I 0.000
AUEXF2481DRAFT_46715 Aureobasidium subglaciale AUEXF2481DRAFT_46715 I 0.000
BAUCODRAFT_304562 Baudoinia compniacensis BAUCODRAFT_304562 I 0.000
Bcin12g02060 Botrytis cinerea Bcin12g02060 I 0.000
ACLA_074570 Aspergillus clavatus CADACLAG00006464 I 0.000
CADAFLAG00003424 Aspergillus flavus CADAFLAG00003424 I 0.000
AFUA_2G15620 Aspergillus fumigatus CADAFUAG00004842 I 0.000
CADANGAG00012260 Aspergillus niger CADANGAG00012260 I 0.000
CADAORAG00005871 Aspergillus oryzae CADAORAG00005871 I 0.000
ATEG_02432 Aspergillus terreus CADATEAG00004930 I 0.000
CFIO01_09528 Colletotrichum fioriniae CFIO01_09528 I 0.000
CH063_12953 Colletotrichum higginsianum CH063_12953 I 0.000
CMQ_4177 Grosmannia clavigera CMQ_4177 I 0.000
COCC4DRAFT_183452 Bipolaris maydis COCC4DRAFT_183452 I 0.000
COCC4DRAFT_71230 Bipolaris maydis COCC4DRAFT_71230 I 0.000
COCCADRAFT_90908 Bipolaris zeicola COCCADRAFT_90908 I 0.000
COCMIDRAFT_102049 Bipolaris oryzae COCMIDRAFT_102049 I 0.000
COCMIDRAFT_81700 Bipolaris oryzae COCMIDRAFT_81700 I 0.000
COCSADRAFT_166376 Bipolaris sorokiniana COCSADRAFT_166376 I 0.000
COCSADRAFT_76883 Bipolaris sorokiniana COCSADRAFT_76883 I 0.000
COCVIDRAFT_37179 Bipolaris victoriae COCVIDRAFT_37179 I 0.000
COCVIDRAFT_89906 Bipolaris victoriae COCVIDRAFT_89906 I 0.000
CSUB01_03920 Colletotrichum sublineola CSUB01_03920 I 0.000
CTHT_0038840 Chaetomium thermophilum CTHT_0038840 I 0.000
DOTSEDRAFT_73784 Dothistroma septosporum DOTSEDRAFT_73784 I 0.000
DOTSEDRAFT_74570 Dothistroma septosporum DOTSEDRAFT_74570 I 0.000
DRE_02232 Drechslerella stenobrocha DRE_02232 I 0.000
EURHEDRAFT_497889 Aspergillus ruber EURHEDRAFT_497889 I 0.000
F503_01662 Ophiostoma piceae uamh F503_01662 I 0.000
FFUJ_04566 Fusarium fujikuroi FFUJ_04566 I 0.000
FGRRES_17662 Fusarium graminearum FGRRES_17662 I 0.000
FPSE_07164 Fusarium pseudograminearum FPSE_07164 I 0.000
G647_02082 Cladophialophora carrionii G647_02082 I 0.000
GGTG_03663 Gaeumannomyces graminis GGTG_03663 I 0.000
GLRG_07228 Colletotrichum graminicola GLRG_07228 I 0.000
GMDG_06572 Pseudogymnoascus destructans GMDG_06572 I 0.000
GSTUM_00004347001 Tuber melanosporum GSTUM_00004347001 I 0.000
H072_2001 Dactylellina haptotyla H072_2001 I 0.000
HMPREF1624_00871 Sporothrix schenckii HMPREF1624_00871 I 0.000
HMPREF1624_07664 Sporothrix schenckii HMPREF1624_07664 I 0.000
LEMA_P035060.1 Leptosphaeria maculans LEMA_P035060.1 I 0.000
M437DRAFT_41113 Aureobasidium melanogenum M437DRAFT_41113 I 0.000
M438DRAFT_373756 Aureobasidium pullulans M438DRAFT_373756 I 0.000
MAPG_01170 Magnaporthe poae MAPG_01170 I 0.000
MBM_00813 Marssonina brunnea MBM_00813 I 0.000
MGG_01414 Magnaporthe oryzae MGG_01414 I 0.000
MYCFIDRAFT_190593 Pseudocercospora fijiensis MYCFIDRAFT_190593 I 0.000
Mycgr3G47382 Zymoseptoria tritici Mycgr3G47382 I 0.000
MYCTH_2310145 Myceliophthora thermophila MYCTH_2310145 I 0.000
NechaG96746 Fusarium solani NechaG96746 I 0.000
NEUTE1DRAFT_80073 Neurospora tetrasperma NEUTE1DRAFT_80073 I 0.000
OIDMADRAFT_199854 Oidiodendron maius OIDMADRAFT_199854 I 0.000
PCH_Pc21g02790 Penicillium rubens PCH_Pc21g02790 I 0.000
PDE_07674 Penicillium oxalicum PDE_07674 I 0.000
PEX1_036960 Penicillium expansum PEX1_036960 I 0.000
PFICI_05114 Pestalotiopsis fici PFICI_05114 I 0.000
PITC_082180 Penicillium italicum PITC_082180 I 0.000
PMAA_036650 Talaromyces marneffei PMAA_036650 I 0.000
PODANS_1_23020 Podospora anserina PODANS_1_23020 I 0.000
PTT_14914 Pyrenophora teres PTT_14914 I 0.000
PV04_08391 Capronia semiimmersa PV04_08391 I 0.000
PV05_08952 Exophiala xenobiotica PV05_08952 I 0.000
PV10_02516 Exophiala mesophila PV10_02516 I 0.000
PV11_07480 Exophiala sideris PV11_07480 I 0.000
S40285_05834 Stachybotrys chlorohalonata S40285_05834 I 0.000
S40288_02557 Stachybotrys chartarum S40288_02557 I 0.000
S40288_09944 Stachybotrys chartarum S40288_09944 I 0.000
SAPIO_CDS7493 Scedosporium apiospermum SAPIO_CDS7493 I 0.000
SBOR_4248 Sclerotinia borealis SBOR_4248 I 0.000
SEPMUDRAFT_150184 Sphaerulina musiva SEPMUDRAFT_150184 I 0.000
SEPMUDRAFT_151346 Sphaerulina musiva SEPMUDRAFT_151346 I 0.000
SETTUDRAFT_31256 Setosphaeria turcica SETTUDRAFT_31256 I 0.000
SMAC_00770 Sordaria macrospora SMAC_00770 I 0.000
SNOG_08740 Phaeosphaeria nodorum SNOG_08740 I 0.000
SPBR_06407 Sporothrix brasiliensis SPBR_06407 I 0.000
SS1G_08351 Sclerotinia sclerotiorum SS1G_08351 I 0.000
THITE_2122523 Thielavia terrestris THITE_2122523 I 0.000
TRIATDRAFT_78601 Trichoderma atroviride TRIATDRAFT_78601 I 0.000
TRIREDRAFT_122208 Trichoderma reesei TRIREDRAFT_122208 I 0.000
TRIVIDRAFT_58714 Trichoderma virens TRIVIDRAFT_58714 I 0.000
TSTA_055480 Talaromyces stipitatus TSTA_055480 I 0.000
UV8b_3245 Ustilaginoidea virens UV8b_3245 I 0.000
V499_08073 Pseudogymnoascus pannorum V499_08073 I 0.000
VDAG_08004 Verticillium dahliae VDAG_08004 I 0.000
VDBG_01258 Verticillium alfalfae VDBG_01258 I 0.000
VHEMI00533 Torrubiella hemipterigena VHEMI00533 I 0.000
VHEMI00604 Torrubiella hemipterigena VHEMI00604 I 0.000
Z518_06938 Rhinocladiella mackenziei Z518_06938 I 0.000
e_gw1.9.639.1 Mycosphaerella graminicola e_gw1.9.639.1 I 0.000
estExt_Genewise1Plus.C_120594 Neurospora discreta estExt_Genewise1Plus.C_120594 I 0.000
estExt_Genewise1Plus.C_150252 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_150252 I 0.000
estExt_Genewise1Plus.C_20967 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_20967 I 0.000
fgenesh1_pm.C_scaffold_10000002 Mycosphaerella fijiensis fgenesh1_pm.C_scaffold_10000002 I 0.000
fgenesh1_pm.sca_82_chr10_2_0000188 Nectria haematococca fgenesh1_pm.sca_82_chr10_2_0000188 I 0.000
AB00609.1 Alternaria brassicicola AB00609.1 I 0.000
e_gw1.00815.24.1 Aspergillus carbonarius e_gw1.00815.24.1 I 0.000
e_gw1.3.120.1 Cryphonectria parasitica e_gw1.3.120.1 I 0.000
estExt_fgenesh1_pg.C_40955 Cryphonectria parasitica estExt_fgenesh1_pg.C_40955 I 0.000
Pc21g02790 Penicillium chrysogenum Pc21g02790 I 0.000
PMAA_036650 Penicillium marneffei PMAA_036650 I 0.000