4088_Multiple (Saccharomyces paradoxus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 4088_Multiple T145981_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GIS1
M00019_2.00 		Saccharomyces cerevisiae
NCCCCTWDNN
NNHWAGGGGN		 PBM
Badis et al.(2008)
GIS1_4481 		0.827 1.000
GIS1
M07449_2.00 		Saccharomyces cerevisiae
HCCCCTWDN
NHWAGGGGD		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0306.1 		0.827 1.000
GIS1
M08515_2.00 		Saccharomyces cerevisiae
HCCCCTWDN
NHWAGGGGD		 Misc
DeBoer et al.(2011)
YDR096W_562 		0.827 1.000
RPH1
M00025_2.00 		Saccharomyces cerevisiae
NNHCCCCTAAN
NTTAGGGGDNN		 PBM
Badis et al.(2008)
RPH1_4571 		0.816 0.911
RPH1
M01531_2.00 		Saccharomyces cerevisiae
YNMCCCCTWWWW
WWWWAGGGGKNR		 PBM
Zhu et al.(2009)
Rph1 		0.816 0.911
RPH1
M07455_2.00 		Saccharomyces cerevisiae
NCCCCTWA
TWAGGGGN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0372.1 		0.816 0.911
RPH1
M08522_2.00 		Saccharomyces cerevisiae
NCCCCTWA
TWAGGGGN		 Misc
DeBoer et al.(2011)
YER169W_547 		0.816 0.911
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
4088_Multiple C2H2 ZF 8 31
4088_Multiple C2H2 ZF 37 58

Links

Other C2H2 ZF family TFs
Other Saccharomyces paradoxus TFs

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GIS1 Saccharomyces cerevisiae YDR096W D 0.827
RPH1 Saccharomyces cerevisiae YER169W D 0.816
Scas_Contig681.19 Saccharomyces castellii Scas_Contig681.19 I 0.792
TBLA_0F03830 Tetrapisispora blattae TBLA_0F03830 I 0.792
TDEL_0A01300 Torulaspora delbrueckii TDEL_0A01300 I 0.816
TPHA_0A01940 Tetrapisispora phaffii TPHA_0A01940 I 0.810
ZBAI_04846 Zygosaccharomyces bailii ZBAI_04846 I 0.792
ZBAI_06407 Zygosaccharomyces bailii ZBAI_06407 I 0.792
ZYRO0B11770g Zygosaccharomyces rouxii ZYRO0B11770g I 0.792
TBLA_0E04210 Tetrapisispora blattae TBLA_0E04210 I 0.759
3770_YDR096W Saccharomyces mikatae 3770_YDR096W I 0.827
4347_Multiple Saccharomyces bayanus 4347_Multiple I 0.827
6173_YER169W Saccharomyces mikatae 6173_YER169W I 0.792
6757_YER169W Saccharomyces paradoxus 6757_YER169W I 0.816
7085_YER169W Saccharomyces bayanus 7085_YER169W I 0.792
KLTH0G14454g Kluyveromyces thermotolerans KLTH0G14454g I 0.792
Kwal_23453 Kluyveromyces waltii Kwal_23453 I 0.792
SAKL0H17842g Lachancea kluyveri SAKL0H17842g I 0.792
KNAG_0H03010 Kazachstania naganishii KNAG_0H03010 I 0.810
AGOS_AGR117C Ashbya gossypii AGOS_AGR117C I 0.792
CAGL0L11880g Candida glabrata CAGL0L11880g I 0.792
Ecym_3520 Eremothecium cymbalariae Ecym_3520 I 0.816
KAFR_0A02380 Kazachstania africana KAFR_0A02380 I 0.768
KAFR_0B02550 Kazachstania africana KAFR_0B02550 I 0.810
KLLA0_C17710g Kluyveromyces lactis KLLA0_C17710g I 0.792
KLTH0G14454g Lachancea thermotolerans KLTH0G14454g I 0.792
KNAG_0G01870 Kazachstania naganishii KNAG_0G01870 I 0.792
AACERI_AaceriAGR117C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAGR117C I 0.792
Kpol_1032p52 Vanderwaltozyma polyspora Kpol_1032p52 I 0.816
LALA0_S07e07030g Lachancea lanzarotensis LALA0_S07e07030g I 0.792
NCAS_0B04840 Naumovozyma castellii NCAS_0B04840 I 0.792
NDAI_0B02250 Naumovozyma dairenensis NDAI_0B02250 I 0.792
SKUD_141701 Saccharomyces kudriavzevii SKUD_141701 I 0.827
SU7_0636 Saccharomyces arboricola SU7_0636 I 0.827
SU7_0955 Saccharomyces arboricola SU7_0955 I 0.792