AMEC006310 (Anopheles melas)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 AMEC006310 T149303_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Kah
M03690_2.00 		Drosophila melanogaster
NVCCACCTGTTN
NAACAGGTGGBN		 SELEX
Nitta et al.(2015)
CG17181_1 		0.768 0.832
Kah
M06137_2.00 		Drosophila melanogaster
VCCACCTGT
ACAGGTGGB		 B1H
Zhu et al.(2011)
CG17181_SANGER_5_FBgn0035144 		0.768 0.832
Kah
M06138_2.00 		Drosophila melanogaster
NVCCACCTGYHVVNN
NNBBDRCAGGTGGBN		 B1H
Zhu et al.(2011)
CG17181_SOLEXA_5_FBgn0035144 		0.768 0.832
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AMEC006310-PA C2H2 ZF 378 400
AMEC006310-PA C2H2 ZF 410 431
AMEC006310-PA C2H2 ZF 435 457
AMEC006310-PA C2H2 ZF 463 485
AMEC006310-PA C2H2 ZF 491 512

Links

Other C2H2 ZF family TFs
Other Anopheles melas TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA008411 Oryza indica BGIOSGA008411 N
BRADI3G45590 Brachypodium distachyon BRADI3G45590 N
GRMZM5G885700 Zea mays GRMZM5G885700 N
LPERR02G16200 Leersia perrieri LPERR02G16200 N
OGLUM02G20510 Oryza glumaepatula OGLUM02G20510 N
OLONG_002405 Oryza longistaminata OLONG_002405 N
OMERI02G19990 Oryza meridionalis OMERI02G19990 N
ONIVA02G22300 Oryza nivara ONIVA02G22300 N
OPUNC02G18120 Oryza punctata OPUNC02G18120 N
ORGLA02G0173200 Oryza glaberrima ORGLA02G0173200 N
ORUFI02G21320 Oryza rufipogon ORUFI02G21320 N
OS02G0551900 Oryza sativa OS02G0551900 N
Traes_6BL_CC009B78A Triticum aestivum Traes_6BL_CC009B78A N
Traes_6DL_F47CFC6D9 Triticum aestivum Traes_6DL_F47CFC6D9 N