CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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D917_07104
(
Trichinella nativa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
D917_07104
T152888_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
D917_07104
C2H2 ZF
202
224
YICKFCGKRFPRSANLTRHLRTH
D917_07104
C2H2 ZF
230
253
YRCQYCERCFSISSNLQRHVRNIH
D917_07104
C2H2 ZF
259
281
FRCPLCERCFGQQTNLDRHLRKH
Links
Other
C2H2 ZF
family TFs
Other
Trichinella nativa
TFs
74 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA04G36620
Glycine max
GLYMA04G36620
N
GLYMA06G18290
Glycine max
GLYMA06G18290
N
GLYMA06G18300
Glycine max
GLYMA06G18300
N
POPTR_0012s09390
Populus trichocarpa
POPTR_0012s09390
N
POPTR_0015s10040
Populus trichocarpa
POPTR_0015s10040
N
TCM_014549
Theobroma cacao
TCM_014549
N
Ca_08787
Cicer arietinum
Ca_08787
N
30147.m013814
Ricinus communis
30147.m013814
N
cassava3225.m1
Manihot esculenta
cassava3225.m1
N
Gorai.006G270100
Gossypium raimondii
Gorai.006G270100
N
Lus10043332.g
Linum usitatissimum
Lus10043332.g
N
SapurV1A.0486s0080
Salix purpurea
SapurV1A.0486s0080
N