CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HPBE_0000797201
(
Heligmosomoides bakeri
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
HPBE_0000797201
T154202_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HPBE_0000797201-mRNA-1
C2H2 ZF
29
51
CACKDCGKLFNSVWYLKQHAVKH
HPBE_0000797201-mRNA-1
C2H2 ZF
57
78
FKCKFCFKTYKFRSNLYQHKCP
Links
Other
C2H2 ZF
family TFs
Other
Heligmosomoides bakeri
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CRE00047
Caenorhabditis remanei
CRE00047
N
0.794
ANCDUO_01084
Ancylostoma duodenale
ANCDUO_01084
N
0.818
ASIM_0002110101
Anisakis simplex
ASIM_0002110101
N
0.794
CGOC_0000456701
Cylicostephanus goldi
CGOC_0000456701
N
0.818
EVEC_0001288301
Enterobius vermicularis
EVEC_0001288301
N
0.798
HCOI02029400
Haemonchus contortus
HCOI02029400
N
0.827
L898_g8368
Steinernema monticolum
L898_g8368
N
0.770
nRc.2.0.1.g23054
Romanomermis culicivorax
nRc.2.0.1.g23054
N
0.782
RSKR_0001155800
Rhabditophanes kr3021
RSKR_0001155800
N
0.794
SPAL_0000767800
Strongyloides papillosus
SPAL_0000767800
N
0.827
SVUK_0000929801
Strongylus vulgaris
SVUK_0000929801
N
0.818