L596_g12501 (Steinernema carpocapsae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 L596_g12501 T154310_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
B0310.2
M00638_2.00 		Caenorhabditis elegans
NNDNCCTCVN
NBGAGGNHNN		 PBM
Narasimhan et al.(2015)
pTH10823 		0.768 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L596_g12501.t1 C2H2 ZF 324 348
L596_g12501.t1 C2H2 ZF 354 376
L596_g12501.t2 C2H2 ZF 115 139
L596_g12501.t2 C2H2 ZF 145 167
L596_g12501.t3 C2H2 ZF 274 298
L596_g12501.t3 C2H2 ZF 304 326

Links

Other C2H2 ZF family TFs
Other Steinernema carpocapsae TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
B0310.2 Caenorhabditis elegans WBGene00015138 D 0.768
SBAD_0000510501 Soboliphyme baturini SBAD_0000510501 I 0.768
L892_g1322 Steinernema scapterisci L892_g1322 I 0.827
L893_g22395 Steinernema glaseri L893_g22395 I 0.822
L898_g26631 Steinernema monticolum L898_g26631 I 0.822
maker-nMf.1.1.scaf08525-snap-gene-0.5 Meloidogyne floridensis maker-nMf.1.1.scaf08525-snap-gene-0.5 I 0.798
MhA1_Contig575.frz3.gene2 Meloidogyne hapla MhA1_Contig575.frz3.gene2 I 0.798
NBR_0000708201 Nippostrongylus brasiliensis NBR_0000708201 I 0.768
nLs.2.1.2.g09564 Litomosoides sigmodontis nLs.2.1.2.g09564 I 0.792
nOo.2.0.1.g11672 Onchocerca ochengi nOo.2.0.1.g11672 I 0.792
OESDEN_02446 Oesophagostomum dentatum OESDEN_02446 I 0.768
PTRK_0000514200 Parastrongyloides trichosuri PTRK_0000514200 I 0.768
RSKR_0000808100 Rhabditophanes kr3021 RSKR_0000808100 I 0.768
L889_g30058 Steinernema feltiae L889_g30058 I 0.822
scaffold28-EXSNAP2012.45 Pristionchus exspectatus scaffold28-EXSNAP2012.45 I 0.768
SPAL_0001464000 Strongyloides papillosus SPAL_0001464000 I 0.768
SSTP_0001056600 Strongyloides stercoralis SSTP_0001056600 I 0.768
SVE_0630300 Strongyloides venezuelensis SVE_0630300 I 0.768
SVUK_0001077701 Strongylus vulgaris SVUK_0001077701 I 0.768
TCNE_0001118001 Toxocara canis TCNE_0001118001 I 0.798
TELCIR_01774 Teladorsagia circumcincta TELCIR_01774 I 0.768
TMUE_s0016009100 Trichuris muris TMUE_s0016009100 I 0.768
TTRE_0000220801 Trichuris trichiura TTRE_0000220801 I 0.768
ANCCAN_15122 Ancylostoma caninum ANCCAN_15122 I 0.768
Bm10487 Brugia malayi Bm10487 I 0.792
CBG08158 Caenorhabditis briggsae CBG08158 I 0.768
CBN30348 Caenorhabditis brenneri CBN30348 I 0.762
CJA07808 Caenorhabditis japonica CJA07808 I 0.768
CRE17142 Caenorhabditis remanei CRE17142 I 0.768
EFV53318 Trichinella spiralis EFV53318 I 0.763
WBGene00240779 Onchocerca volvulus WBGene00240779 I 0.792
Minc12888 Meloidogyne incognita Minc12888 I 0.798
ACAC_0000427301 Angiostrongylus cantonensis ACAC_0000427301 I 0.768
ALUE_0001098001 Ascaris lumbricoides ALUE_0001098001 I 0.798
WUBG_01471 Wuchereria bancrofti WUBG_01471 I 0.792
ANCCEY_00087 Ancylostoma ceylanicum ANCCEY_00087 I 0.768
ASU_06106 Ascaris suum ASU_06106 I 0.798
BTMF_0001757301 Brugia timori BTMF_0001757301 I 0.792
BXY_1612500 Bursaphelenchus xylophilus BXY_1612500 I 0.762
D917_07770 Trichinella nativa D917_07770 I 0.768
DICVIV_10692 Dictyocaulus viviparus DICVIV_10692 I 0.768
Hba_12492 Heterorhabditis bacteriophora Hba_12492 I 0.768
HCOI00400800 Haemonchus contortus HCOI00400800 I 0.768