CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SMUV_0000946701
(
Syphacia muris
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SMUV_0000946701
T156451_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMUV_0000946701-mRNA-1
C2H2 ZF
252
274
YTCKFCTKVFPRSANLTRHLRTH
SMUV_0000946701-mRNA-1
C2H2 ZF
280
303
YKCQYCERSFSISSNLQRHVRNIH
SMUV_0000946701-mRNA-1
C2H2 ZF
309
331
FRCDRCDRCFGQQTNLDRHIKKH
Links
Other
C2H2 ZF
family TFs
Other
Syphacia muris
TFs
74 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA04G36620
Glycine max
GLYMA04G36620
N
GLYMA06G18290
Glycine max
GLYMA06G18290
N
GLYMA06G18300
Glycine max
GLYMA06G18300
N
POPTR_0012s09390
Populus trichocarpa
POPTR_0012s09390
N
POPTR_0015s10040
Populus trichocarpa
POPTR_0015s10040
N
TCM_014549
Theobroma cacao
TCM_014549
N
Ca_08787
Cicer arietinum
Ca_08787
N
30147.m013814
Ricinus communis
30147.m013814
N
cassava3225.m1
Manihot esculenta
cassava3225.m1
N
Gorai.006G270100
Gossypium raimondii
Gorai.006G270100
N
Lus10043332.g
Linum usitatissimum
Lus10043332.g
N
SapurV1A.0486s0080
Salix purpurea
SapurV1A.0486s0080
N