CJA03417 (Caenorhabditis japonica)
C2HC ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01530 (zf-C2HC) IPR002515 CJA03417 T158874_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ztf-11
M00650_2.00 		Caenorhabditis elegans
VAAGTTTN
NAAACTTB		 PBM
Narasimhan et al.(2015)
pTH9925 		0.982 0.982
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CJA03417 C2HC ZF 202 229
CJA03417 C2HC ZF 248 276

Links

Other C2HC ZF family TFs
Other Caenorhabditis japonica TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK07858.1 Cannabis sativa PK07858.1 D 0.000
29738.m001043 Ricinus communis 29738.m001043 I 0.000
PGSC0003DMG400007457 Solanum tuberosum PGSC0003DMG400007457 I 0.000
Pm029004 Prunus mume Pm029004 I 0.000
Cla020671 Citrullus lanatus Cla020671 I 0.000
Ca_08440 Cicer arietinum Ca_08440 I 0.000
VIT_01s0011g02940 Vitis vinifera VIT_01s0011g02940 I 0.000
Traes_6BL_AEB13ECDE Triticum aestivum Traes_6BL_AEB13ECDE I 0.000
TCM_011873 Theobroma cacao TCM_011873 I 0.000
Si012401m.g Setaria italica Si012401m.g I 0.000
Si000845m.g Setaria italica Si000845m.g I 0.000
SELMODRAFT_56610 Selaginella moellendorffii SELMODRAFT_56610 I 0.000
SELMODRAFT_46532 Selaginella moellendorffii SELMODRAFT_46532 I 0.000
Sb06g025060 Sorghum bicolor Sb06g025060 I 0.000
Sb06g025040 Sorghum bicolor Sb06g025040 I 0.000
PRUPE_ppa019406mg Prunus persica PRUPE_ppa019406mg I 0.000
POPTR_0010s14010 Populus trichocarpa POPTR_0010s14010 I 0.000
POPTR_0008s11490 Populus trichocarpa POPTR_0008s11490 I 0.000
AMTR_s00101p00150740 Amborella trichopoda AMTR_s00101p00150740 I 0.000
Gorai.013G079600 Gossypium raimondii Gorai.013G079600 I 0.000
SapurV1A.3056s0010 Salix purpurea SapurV1A.3056s0010 I 0.000
SapurV1A.0304s0070 Salix purpurea SapurV1A.0304s0070 I 0.000
SapurV1A.0079s0530 Salix purpurea SapurV1A.0079s0530 I 0.000
orange1.1g037785m.g Citrus sinensis orange1.1g037785m.g I 0.000
MDP0000319726 Malus domestica MDP0000319726 I 0.000
MDP0000271420 Malus domestica MDP0000271420 I 0.000
Lus10035056.g Linum usitatissimum Lus10035056.g I 0.000
Lus10021711.g Linum usitatissimum Lus10021711.g I 0.000
cassava16550.m1 Manihot esculenta cassava16550.m1 I 0.000
Gorai.008G186700 Gossypium raimondii Gorai.008G186700 I 0.000
evm.TU.supercontig_53.118 Carica papaya evm.TU.supercontig_53.118 I 0.000
Eucgr.G02351 Eucalyptus grandis Eucgr.G02351 I 0.000
Ciclev10031900m.g Citrus clementina Ciclev10031900m.g I 0.000
Aquca_002_01095 Aquilegia coerulea Aquca_002_01095 I 0.000
mgf017635m Mimulus guttatus mgf017635m I 0.000
Cucsa.283920 Cucumis sativus Cucsa.283920 I 0.000
cassava46299.m1 Manihot esculenta cassava46299.m1 I 0.000
AMTR_s00009p00242790 Amborella trichopoda AMTR_s00009p00242790 I 0.000
MTR_1g093750 Medicago truncatula MTR_1g093750 I 0.000
LPERR04G17400 Leersia perrieri LPERR04G17400 I 0.000
GSMUA_Achr1G21280_001 Musa acuminata GSMUA_Achr1G21280_001 I 0.000
GSMUA_Achr11G21270_001 Musa acuminata GSMUA_Achr11G21270_001 I 0.000
GSMUA_Achr11G13440_001 Musa acuminata GSMUA_Achr11G13440_001 I 0.000
GRMZM2G172795 Zea mays GRMZM2G172795 I 0.000
GLYMA20G32660 Glycine max GLYMA20G32660 I 0.000
GLYMA10G34910 Glycine max GLYMA10G34910 I 0.000
F775_14190 Aegilops tauschii F775_14190 I 0.000
BRADI3G54070 Brachypodium distachyon BRADI3G54070 I 0.000
GSMUA_Achr5G20600_001 Musa acuminata GSMUA_Achr5G20600_001 N 0.000
Traes_2AL_4F71A8FB4 Triticum aestivum Traes_2AL_4F71A8FB4 N 0.000
OB01G30110 Oryza brachyantha OB01G30110 N 0.000
TRIUR3_18279 Triticum urartu TRIUR3_18279 N 0.000
TRIUR3_26157 Triticum urartu TRIUR3_26157 N 0.000
TRIUR3_35186 Triticum urartu TRIUR3_35186 N 0.000
MLOC_38470 Hordeum vulgare MLOC_38470 N 0.000
LPERR08G11070 Leersia perrieri LPERR08G11070 N 0.000
BGIOSGA003819 Oryza indica BGIOSGA003819 N 0.000
LPERR04G17390 Leersia perrieri LPERR04G17390 N 0.000
LPERR04G17380 Leersia perrieri LPERR04G17380 N 0.000
BGIOSGA003821 Oryza indica BGIOSGA003821 N 0.000
BGIOSGA014565 Oryza indica BGIOSGA014565 N 0.000
Pavir.J34298 Panicum virgatum Pavir.J34298 N 0.000
Pavir.Cb00833 Panicum virgatum Pavir.Cb00833 N 0.000
BGIOSGA014566 Oryza indica BGIOSGA014566 N 0.000
BGIOSGA014567 Oryza indica BGIOSGA014567 N 0.000
F775_19744 Aegilops tauschii F775_19744 N 0.000
F775_18830 Aegilops tauschii F775_18830 N 0.000
BGIOSGA015472 Oryza indica BGIOSGA015472 N 0.000
F775_10624 Aegilops tauschii F775_10624 N 0.000
ORUFI04G22890 Oryza rufipogon ORUFI04G22890 N 0.000
OLONG_016960 Oryza longistaminata OLONG_016960 N 0.000
OMERI01G18770 Oryza meridionalis OMERI01G18770 N 0.000
OMERI01G18860 Oryza meridionalis OMERI01G18860 N 0.000
OMERI04G17790 Oryza meridionalis OMERI04G17790 N 0.000
OMERI04G17820 Oryza meridionalis OMERI04G17820 N 0.000
ONIVA01G22920 Oryza nivara ONIVA01G22920 N 0.000
ONIVA01G22980 Oryza nivara ONIVA01G22980 N 0.000
ONIVA04G19650 Oryza nivara ONIVA04G19650 N 0.000
ONIVA04G19860 Oryza nivara ONIVA04G19860 N 0.000
OPUNC04G19030 Oryza punctata OPUNC04G19030 N 0.000
OPUNC04G19040 Oryza punctata OPUNC04G19040 N 0.000
ORGLA04G0183800 Oryza glaberrima ORGLA04G0183800 N 0.000
ORGLA04G0183900 Oryza glaberrima ORGLA04G0183900 N 0.000
ORGLA11G0077500 Oryza glaberrima ORGLA11G0077500 N 0.000
ORUFI01G23050 Oryza rufipogon ORUFI01G23050 N 0.000
OLONG_016958 Oryza longistaminata OLONG_016958 N 0.000
ORUFI04G22910 Oryza rufipogon ORUFI04G22910 N 0.000
ORUFI11G09150 Oryza rufipogon ORUFI11G09150 N 0.000
OS04G0557200 Oryza sativa OS04G0557200 N 0.000
OS04G0557800 Oryza sativa OS04G0557800 N 0.000
OLONG_009946 Oryza longistaminata OLONG_009946 N 0.000
OGLUM04G21350 Oryza glumaepatula OGLUM04G21350 N 0.000
OGLUM04G21260 Oryza glumaepatula OGLUM04G21260 N 0.000
OGLUM01G23970 Oryza glumaepatula OGLUM01G23970 N 0.000
OBART04G21370 Oryza barthii OBART04G21370 N 0.000
OBART04G21320 Oryza barthii OBART04G21320 N 0.000
OBART01G20350 Oryza barthii OBART01G20350 N 0.000
OB04G28390 Oryza brachyantha OB04G28390 N 0.000
OB04G28380 Oryza brachyantha OB04G28380 N 0.000
OB04G28350 Oryza brachyantha OB04G28350 N 0.000