CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ISCW018799
(
Ixodes scapularis
)
C2HC ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01530 (zf-C2HC)
IPR002515
ISCW018799
T159353_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ztf-11
M00650_2.00
Caenorhabditis elegans
VAAGTTTN
NAAACTTB
PBM
Narasimhan et al.(2015)
pTH9925
0.789
0.789
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ISCW018799-PA
C2HC ZF
2
29
KCPTPGCNGTGHVTGLYSHHRSLSGCPR
ISCW018799-PA
C2HC ZF
46
74
KCPTPGCNGRGHVNSNRNSHRSLSGCPIA
Links
Other
C2HC ZF
family TFs
Other
Ixodes scapularis
TFs
71 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RBPJ
Homo sapiens
ENSG00000168214
D
0.000
BTMF_0000429201
Brugia timori
BTMF_0000429201
I
0.000
TRE_0000568701
Trichobilharzia regenti
TRE_0000568701
I
0.000
SMUV_0001013801
Syphacia muris
SMUV_0001013801
I
0.000
SMTD_0001089601
Schistosoma mattheei
SMTD_0001089601
I
0.000
SMRZ_0000802101
Schistosoma margrebowiei
SMRZ_0000802101
I
0.000
SCUD_0000326701
Schistosoma curassoni
SCUD_0000326701
I
0.000
scaffold595-EXSNAP2012.9
Pristionchus exspectatus
scaffold595-EXSNAP2012.9
I
0.000
NECAME_17145
Necator americanus
NECAME_17145
I
0.000
GPLIN_001569000
Globodera pallida
GPLIN_001569000
I
0.000
D915_08967
Fasciola hepatica
D915_08967
I
0.000
RBPJL
Canis familiaris
ENSCAFG00000009670
I
0.000
augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf33168-processed-gene-0.0
I
0.000
Sjc_0108400
Schistosoma japonicum
Sjc_0108400
I
0.000
Myotis_brandtii_RBPJL_10002478
Myotis brandtii
Myotis_brandtii_RBPJL_10002478
I
0.000
ENSVPAG00000005031
Vicugna pacos
ENSVPAG00000005031
I
0.000
RBPJL
Monodelphis domestica
ENSMODG00000016187
I
0.000
RBPJL
Loxodonta africana
ENSLAFG00000008148
I
0.000
RBPJL
Echinops telfairi
ENSETEG00000005066
I
0.000
RBPJL
Equus caballus
ENSECAG00000013463
I
0.000
nRc.2.0.1.g21296
Romanomermis culicivorax
nRc.2.0.1.g21296
N
0.000
Aan_R003297
Calypte anna
Aan_R003297
N
0.000