Cmyd_10014184 (Chelonia mydas)
C2HC ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01530 (zf-C2HC) IPR002515 Cmyd_10014184 T159431_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ztf-11
M00650_2.00 		Caenorhabditis elegans
VAAGTTTN
NAAACTTB		 PBM
Narasimhan et al.(2015)
pTH9925 		0.789 0.789
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cmyd_10014184 C2HC ZF 325 352
Cmyd_10014184 C2HC ZF 369 397

Links

Other C2HC ZF family TFs
Other Chelonia mydas TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Physo138014 Phytophthora sojae Physo138014 N
maker-pir_contig_4474-fgenesh-gene-0.0 Pythium irregulare maker-pir_contig_4474-fgenesh-gene-0.0 N
maker-pir_contig_636-snap-gene-0.12 Pythium irregulare maker-pir_contig_636-snap-gene-0.12 N
maker-piw_contig_10342-snap-gene-0.1 Pythium iwayamai maker-piw_contig_10342-snap-gene-0.1 N
maker-piw_contig_9122-snap-gene-0.1 Pythium iwayamai maker-piw_contig_9122-snap-gene-0.1 N
maker-pve_contig_1305-fgenesh-gene-0.0 Pythium vexans maker-pve_contig_1305-fgenesh-gene-0.0 N
maker-pve_contig_563-fgenesh-gene-0.8 Pythium vexans maker-pve_contig_563-fgenesh-gene-0.8 N
maker-pve_contig_642-fgenesh-gene-0.5 Pythium vexans maker-pve_contig_642-fgenesh-gene-0.5 N
Phyra75440 Phytophthora ramorum Phyra75440 N
Phyra80975 Phytophthora ramorum Phyra80975 N
Phyra85808 Phytophthora ramorum Phyra85808 N
Phyra85976 Phytophthora ramorum Phyra85976 N
Physo130849 Phytophthora sojae Physo130849 N
Physo134017 Phytophthora sojae Physo134017 N
Physo134018 Phytophthora sojae Physo134018 N
maker-pir_contig_1338-fgenesh-gene-0.2 Pythium irregulare maker-pir_contig_1338-fgenesh-gene-0.2 N
Physo142188 Phytophthora sojae Physo142188 N
Physo142190 Phytophthora sojae Physo142190 N
Physo142191 Phytophthora sojae Physo142191 N
Physo142192 Phytophthora sojae Physo142192 N
PITG_04694 Phytophthora infestans PITG_04694 N
PITG_04700 Phytophthora infestans PITG_04700 N
PITG_20387 Phytophthora infestans PITG_20387 N
PYU1_G007486 Pythium ultimum PYU1_G007486 N
PYU1_G007487 Pythium ultimum PYU1_G007487 N
e_gw1.457.7.1 Phytophthora capsici e_gw1.457.7.1 N
estExt_fgenesh1_kg.C_21048 Phytophthora capsici estExt_fgenesh1_kg.C_21048 N
estExt_fgenesh1_kg.C_21051 Phytophthora capsici estExt_fgenesh1_kg.C_21051 N
fgenesh1_pg.C_scaffold_17000111 Phytophthora capsici fgenesh1_pg.C_scaffold_17000111 N
fgenesh1_pm.C_scaffold_10000249 Phytophthora capsici fgenesh1_pm.C_scaffold_10000249 N
F443_22431 Phytophthora parasitica F443_22431 N
SPRG_03693 Saprolegnia parasitica SPRG_03693 N
SPRG_04538 Saprolegnia parasitica SPRG_04538 N
SPRG_09686 Saprolegnia parasitica SPRG_09686 N
SPRG_11849 Saprolegnia parasitica SPRG_11849 N
ALNC14_036480 Albugo laibachii ALNC14_036480 N
ALNC14_092860 Albugo laibachii ALNC14_092860 N
ALNC14_110220 Albugo laibachii ALNC14_110220 N
F443_00152 Phytophthora parasitica F443_00152 N
F443_08033 Phytophthora parasitica F443_08033 N
F443_13225 Phytophthora parasitica F443_13225 N
F443_15764 Phytophthora parasitica F443_15764 N
F443_15765 Phytophthora parasitica F443_15765 N
F443_18702 Phytophthora parasitica F443_18702 N
F443_18703 Phytophthora parasitica F443_18703 N
SPRG_01018 Saprolegnia parasitica SPRG_01018 N
fgenesh_scip_prom.28083.11749 Phytophthora lateralis fgenesh_scip_prom.28083.11749 N
fgenesh_scip_prom.28083.12007 Phytophthora lateralis fgenesh_scip_prom.28083.12007 N
fgenesh_scip_prom.28083.5336 Phytophthora lateralis fgenesh_scip_prom.28083.5336 N
fgenesh_scip_prom.46568.6540 Phytophthora kernoviae fgenesh_scip_prom.46568.6540 N
fgenesh_scip_prom.46568.9529 Phytophthora kernoviae fgenesh_scip_prom.46568.9529 N
GSPATT00037921001 Paramecium tetraurelia GSPATT00037921001 N
HpaG802951 Hyaloperonospora arabidopsidis HpaG802951 N
HpaG810452 Hyaloperonospora arabidopsidis HpaG810452 N
maker-pag1_scaffold_440-fgenesh-gene-0.4 Pythium aphanidermatum maker-pag1_scaffold_440-fgenesh-gene-0.4 N
maker-pag1_scaffold_526-fgenesh-gene-0.3 Pythium aphanidermatum maker-pag1_scaffold_526-fgenesh-gene-0.3 N
maker-pag1_scaffold_539-snap-gene-0.8 Pythium aphanidermatum maker-pag1_scaffold_539-snap-gene-0.8 N
maker-pag1_scaffold_785-snap-gene-0.4 Pythium aphanidermatum maker-pag1_scaffold_785-snap-gene-0.4 N
maker-par_contig_2316-fgenesh-gene-0.0 Pythium arrhenomanes maker-par_contig_2316-fgenesh-gene-0.0 N