CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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D917_04267
(
Trichinella nativa
)
C2HC ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01530 (zf-C2HC)
IPR002515
D917_04267
T159619_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
D917_04267
C2HC ZF
357
384
KCPTPGCDGSGHSTGLYPHHRSLSGCPR
D917_04267
C2HC ZF
402
429
RCPVSGCTGKGHVNSNRSSHRSISGCPL
D917_04267
C2HC ZF
702
730
RCPTIGCDGSGHITGNYSSHRSLSGCPRA
D917_04267
C2HC ZF
744
772
RCPVPGCDGSGHITGKYLSHRSVSGCPMA
Links
Other
C2HC ZF
family TFs
Other
Trichinella nativa
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CG43689
Drosophila melanogaster
FBgn0263772
I
0.719
tetur15g00740
Tetranychus urticae
tetur15g00740
N
0.711
TMUE_s0020007600
Trichuris muris
TMUE_s0020007600
N
0.904
D918_01045
Trichuris suis
D918_01045
N
0.912
ASTEI01189
Anopheles stephensi
ASTEI01189
N
0.737
ASIS023610
Anopheles sinensis
ASIS023610
N
0.798
AQUA002448
Anopheles quadriannulatus
AQUA002448
N
0.798
AMIN005800
Anopheles minimus
AMIN005800
N
0.798
AMEC011182
Anopheles melas
AMEC011182
N
0.798
AFUN000252
Anopheles funestus
AFUN000252
N
0.798
ADIR004650
Anopheles dirus
ADIR004650
N
0.798
ACUA023712
Anopheles culicifacies
ACUA023712
N
0.798
ACHR008455
Anopheles christyi
ACHR008455
N
0.737
AARA002561
Anopheles arabiensis
AARA002561
N
0.798
LDEC007508
Leptinotarsa decemlineata
LDEC007508
N
0.781
AAEL001230
Aedes aegypti
AAEL001230
N
0.789
MCINX013435
Melitaea cinxia
MCINX013435
N
0.789
MYT1
Takifugu rubripes
ENSTRUG00000002124
N
0.763
MYT1L
Pteropus vampyrus
ENSPVAG00000001625
N
0.728
ENSOARG00000005304
Ovis aries
ENSOARG00000005304
N
0.722
ENSMEUG00000001386
Macropus eugenii
ENSMEUG00000001386
N
0.774
ENSGMOG00000000679
Gadus morhua
ENSGMOG00000000679
N
0.798
ENSCSAVG00000009233
Ciona savignyi
ENSCSAVG00000009233
N
0.737
ST18
Callithrix jacchus
ENSCJAG00000014630
N
0.778
ci-mytf
Ciona intestinalis
ENSCING00000007794
N
0.737
EFV52052
Trichinella spiralis
EFV52052
N
0.746
CGI_10022679
Crassostrea gigas
CGI_10022679
N
0.702
AGAP000875
Anopheles gambiae
AGAP000875
N
0.798