NBR_0001165301 (Nippostrongylus brasiliensis)
C2HC ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01530 (zf-C2HC) IPR002515 NBR_0001165301 T159655_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ztf-11
M00650_2.00 		Caenorhabditis elegans
VAAGTTTN
NAAACTTB		 PBM
Narasimhan et al.(2015)
pTH9925 		0.947 0.947
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
NBR_0001165301-mRNA-1 C2HC ZF 88 115
NBR_0001165301-mRNA-1 C2HC ZF 134 162

Links

Other C2HC ZF family TFs
Other Nippostrongylus brasiliensis TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TGA6 Arabidopsis thaliana AT3G12250 D 0.000
TGA2 Arabidopsis thaliana AT5G06950 D 0.000
TGA5 Arabidopsis thaliana AT5G06960 D 0.000
HBP1B_WHEAT Triticum aestivum HBP1B_WHEAT D 0.000
PK09021.1 Cannabis sativa PK09021.1 D 0.000
BGIOSGA003265 Oryza indica BGIOSGA003265 I 0.000
Bo1g139470 Brassica oleracea Bo1g139470 I 0.000
Bo2g007460 Brassica oleracea Bo2g007460 I 0.000
Bo3g064830 Brassica oleracea Bo3g064830 I 0.000
Bo5g133550 Brassica oleracea Bo5g133550 I 0.000
Bo9g175710 Brassica oleracea Bo9g175710 I 0.000
Bra001443 Brassica rapa Bra001443 I 0.000
Bra009241 Brassica rapa Bra009241 I 0.000
Bra028713 Brassica rapa Bra028713 I 0.000
Bra034767 Brassica rapa Bra034767 I 0.000
Bra038705 Brassica rapa Bra038705 I 0.000
BRADI2G10830 Brachypodium distachyon BRADI2G10830 I 0.000
TGA6 Arabidopsis lyrata fgenesh2_kg.3__1288__AT3G12250.4 I 0.000
AHBP-1B Arabidopsis lyrata fgenesh2_kg.6__644__AT5G06950.1 I 0.000
OBF5 Arabidopsis lyrata fgenesh2_kg.6__648__AT5G06960.1 I 0.000
GLYMA03G28320 Glycine max GLYMA03G28320 I 0.000
GLYMA10G44270 Glycine max GLYMA10G44270 I 0.000
GLYMA13G26280 Glycine max GLYMA13G26280 I 0.000
GLYMA15G37220 Glycine max GLYMA15G37220 I 0.000
GLYMA19G31050 Glycine max GLYMA19G31050 I 0.000
GLYMA20G39050 Glycine max GLYMA20G39050 I 0.000
GRMZM2G030280 Zea mays GRMZM2G030280 I 0.000
GSMUA_Achr10G00340_001 Musa acuminata GSMUA_Achr10G00340_001 I 0.000
GSMUA_Achr11G25140_001 Musa acuminata GSMUA_Achr11G25140_001 I 0.000
GSMUA_Achr3G25020_001 Musa acuminata GSMUA_Achr3G25020_001 I 0.000
GSMUA_Achr8G05800_001 Musa acuminata GSMUA_Achr8G05800_001 I 0.000
LPERR01G10700 Leersia perrieri LPERR01G10700 I 0.000
MTR_7g089800 Medicago truncatula MTR_7g089800 I 0.000
MTR_8g040120 Medicago truncatula MTR_8g040120 I 0.000
OB01G21470 Oryza brachyantha OB01G21470 I 0.000
OBART01G11380 Oryza barthii OBART01G11380 I 0.000
ONIVA01G13810 Oryza nivara ONIVA01G13810 I 0.000
OPUNC01G11270 Oryza punctata OPUNC01G11270 I 0.000
ORUFI01G12420 Oryza rufipogon ORUFI01G12420 I 0.000
TGA2.3 Oryza sativa OS01G0279900 I 0.000
PGSC0003DMG400009449 Solanum tuberosum PGSC0003DMG400009449 I 0.000
POPTR_0001s06700 Populus trichocarpa POPTR_0001s06700 I 0.000
POPTR_0006s03720 Populus trichocarpa POPTR_0006s03720 I 0.000
PAN Populus trichocarpa POPTR_0008s11710 I 0.000
POPTR_0016s03590 Populus trichocarpa POPTR_0016s03590 I 0.000
PRUPE_ppa005279mg Prunus persica PRUPE_ppa005279mg I 0.000
Sb03g006790 Sorghum bicolor Sb03g006790 I 0.000
Si002195m.g Setaria italica Si002195m.g I 0.000
Solyc11g064950.1 Solanum lycopersicum Solyc11g064950.1 I 0.000
TCM_011845 Theobroma cacao TCM_011845 I 0.000
TCM_023491 Theobroma cacao TCM_023491 I 0.000
TCM_023492 Theobroma cacao TCM_023492 I 0.000
TRAES3BF003000030CFD_g Triticum aestivum TRAES3BF003000030CFD_g I 0.000
PAN Vitis vinifera VIT_01s0011g03230 I 0.000
VIT_08s0007g05170 Vitis vinifera VIT_08s0007g05170 I 0.000
VIT_13s0084g00660 Vitis vinifera VIT_13s0084g00660 I 0.000
Ca_07170 Cicer arietinum Ca_07170 I 0.000
Ca_10901 Cicer arietinum Ca_10901 I 0.000
Ca_17971 Cicer arietinum Ca_17971 I 0.000
Cla002918 Citrullus lanatus Cla002918 I 0.000
Cla010092 Citrullus lanatus Cla010092 I 0.000
Cla022393 Citrullus lanatus Cla022393 I 0.000
Pm016643 Prunus mume Pm016643 I 0.000
Pm028917 Prunus mume Pm028917 I 0.000
30131.m007163 Ricinus communis 30131.m007163 I 0.000
cassava1426.valid.m1 Manihot esculenta cassava1426.valid.m1 I 0.000
cassava1427.valid.m1 Manihot esculenta cassava1427.valid.m1 I 0.000
cassava22236.valid.m1 Manihot esculenta cassava22236.valid.m1 I 0.000
cassava22237.valid.m1 Manihot esculenta cassava22237.valid.m1 I 0.000
cassava6928.valid.m1 Manihot esculenta cassava6928.valid.m1 I 0.000
Cucsa.005120 Cucumis sativus Cucsa.005120 I 0.000
Cucsa.307820 Cucumis sativus Cucsa.307820 I 0.000
Cucsa.337740 Cucumis sativus Cucsa.337740 I 0.000
mgf005858m Mimulus guttatus mgf005858m I 0.000
Aquca_004_00791 Aquilegia coerulea Aquca_004_00791 I 0.000
Aquca_009_00424 Aquilegia coerulea Aquca_009_00424 I 0.000
Bostr.13129s0278 Boechera stricta Bostr.13129s0278 I 0.000
Bostr.13129s0279 Boechera stricta Bostr.13129s0279 I 0.000
Bostr.3640s0002 Boechera stricta Bostr.3640s0002 I 0.000
Cagra.0430s0055 Capsella grandiflora Cagra.0430s0055 I 0.000
Cagra.16209s0003 Capsella grandiflora Cagra.16209s0003 I 0.000
Cagra.16209s0004 Capsella grandiflora Cagra.16209s0004 I 0.000
Carubv10001409m.g Capsella rubella Carubv10001409m.g I 0.000
Carubv10001413m.g Capsella rubella Carubv10001413m.g I 0.000
Ciclev10001081m.g Citrus clementina Ciclev10001081m.g I 0.000
Ciclev10005080m.g Citrus clementina Ciclev10005080m.g I 0.000
Eucgr.A02240 Eucalyptus grandis Eucgr.A02240 I 0.000
Eucgr.G03217 Eucalyptus grandis Eucgr.G03217 I 0.000
Eucgr.K01643 Eucalyptus grandis Eucgr.K01643 I 0.000
evm.TU.supercontig_1.202 Carica papaya evm.TU.supercontig_1.202 I 0.000
evm.TU.supercontig_5.165 Carica papaya evm.TU.supercontig_5.165 I 0.000
evm.TU.supercontig_847.1 Carica papaya evm.TU.supercontig_847.1 I 0.000
gene21882-v1.0-hybrid Fragaria vesca gene21882-v1.0-hybrid I 0.000
Gorai.007G352600 Gossypium raimondii Gorai.007G352600 I 0.000
Gorai.008G185000 Gossypium raimondii Gorai.008G185000 I 0.000
Gorai.011G217200 Gossypium raimondii Gorai.011G217200 I 0.000
Gorai.013G001700 Gossypium raimondii Gorai.013G001700 I 0.000
Gorai.013G004400 Gossypium raimondii Gorai.013G004400 I 0.000
Gorai.013G081100 Gossypium raimondii Gorai.013G081100 I 0.000
Lus10008658.g Linum usitatissimum Lus10008658.g I 0.000
Lus10024140.g Linum usitatissimum Lus10024140.g I 0.000
Lus10026166.g Linum usitatissimum Lus10026166.g I 0.000
MDP0000262210 Malus domestica MDP0000262210 I 0.000
MDP0000300532 Malus domestica MDP0000300532 I 0.000
MDP0000320524 Malus domestica MDP0000320524 I 0.000
MDP0000536881 Malus domestica MDP0000536881 I 0.000
orange1.1g015258m.g Citrus sinensis orange1.1g015258m.g I 0.000
orange1.1g045786m.g Citrus sinensis orange1.1g045786m.g I 0.000
Pavir.Ea01074 Panicum virgatum Pavir.Ea01074 I 0.000
Pavir.Eb01160 Panicum virgatum Pavir.Eb01160 I 0.000
SapurV1A.0079s0330 Salix purpurea SapurV1A.0079s0330 I 0.000
SapurV1A.0189s0240 Salix purpurea SapurV1A.0189s0240 I 0.000
SapurV1A.0196s0260 Salix purpurea SapurV1A.0196s0260 I 0.000
Thhalv10014082m.g Eutrema salsugineum Thhalv10014082m.g I 0.000
Thhalv10021187m.g Eutrema salsugineum Thhalv10021187m.g I 0.000
PK13754.1 Cannabis sativa PK13754.1 I 0.000
chr1.CM0009.80.nd Lotus japonicus chr1.CM0009.80.nd I 0.000
OPUNC06G09770 Oryza punctata OPUNC06G09770 N 0.000
mgf016587m Mimulus guttatus mgf016587m N 0.000