CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.011G057600
(
Gossypium raimondii
)
CBF/NF-Y
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02045 (CBFB_NFYA)
IPR001289
Gorai.011G057600
T160691_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.011G057600.1
CBF/NF-Y
186
241
EPIYVNAKQYQAILRRRQYRAKLEAQNKLIKVRKPYLHESRHLHALKRARGNGGRF
Gorai.011G057600.2
CBF/NF-Y
185
240
EPIYVNAKQYQAILRRRQYRAKLEAQNKLIKVRKPYLHESRHLHALKRARGNGGRF
Gorai.011G057600.3
CBF/NF-Y
160
215
EPIYVNAKQYQAILRRRQYRAKLEAQNKLIKVRKPYLHESRHLHALKRARGNGGRF
Gorai.011G057600.4
CBF/NF-Y
77
132
EPIYVNAKQYQAILRRRQYRAKLEAQNKLIKVRKPYLHESRHLHALKRARGNGGRF
Gorai.011G057600.5
CBF/NF-Y
185
231
EPIYVNAKQYQAILRRRQYRAKLEAQNKLIKVRKVCFFKFFLLAARE
Gorai.011G057600.6
CBF/NF-Y
185
240
EPIYVNAKQYQAILRRRQYRAKLEAQNKLIKVRKPYLHESRHLHALKRARGNGGRF
Links
Other
CBF/NF-Y
family TFs
Other
Gossypium raimondii
TFs
494 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000015014
Ailuropoda melanoleuca
ENSAMEG00000015014
I
0.000
ST18
Homo sapiens
ENSG00000147488
I
0.000
MYT1L
Homo sapiens
ENSG00000186487
I
0.000
ENSLACG00000008399
Latimeria chalumnae
ENSLACG00000008399
I
0.000
MYT1L
Macaca mulatta
ENSMMUG00000009310
I
0.000
MYT1L
Anolis carolinensis
ENSACAG00000005667
N
0.000
MYT1
Anolis carolinensis
ENSACAG00000006249
N
0.000
ST18
Anolis carolinensis
ENSACAG00000017961
N
0.000
ENSAMEG00000002048
Ailuropoda melanoleuca
ENSAMEG00000002048
N
0.000
ENSAMEG00000014764
Ailuropoda melanoleuca
ENSAMEG00000014764
N
0.000
ENSAMXG00000001873
Astyanax mexicanus
ENSAMXG00000001873
N
0.000
ENSAMXG00000002473
Astyanax mexicanus
ENSAMXG00000002473
N
0.000
ENSAMXG00000013383
Astyanax mexicanus
ENSAMXG00000013383
N
0.000
ENSAMXG00000013895
Astyanax mexicanus
ENSAMXG00000013895
N
0.000
ENSAPLG00000003822
Anas platyrhynchos
ENSAPLG00000003822
N
0.000
ENSAPLG00000007386
Anas platyrhynchos
ENSAPLG00000007386
N
0.000
ENSAPLG00000016052
Anas platyrhynchos
ENSAPLG00000016052
N
0.000
ST18
Bos taurus
ENSBTAG00000005560
N
0.000
MYT1
Bos taurus
ENSBTAG00000006352
N
0.000
MYT1L
Canis familiaris
ENSCAFG00000003240
N
0.000
ST18
Canis familiaris
ENSCAFG00000006762
N
0.000
MYT1
Canis familiaris
ENSCAFG00000013222
N
0.000
ST18
Choloepus hoffmanni
ENSCHOG00000010565
N
0.000
MYT1L
Callithrix jacchus
ENSCJAG00000007286
N
0.000
ST18
Callithrix jacchus
ENSCJAG00000014630
N
0.000
ST18
Cavia porcellus
ENSCPOG00000005486
N
0.000
MYT1
Cavia porcellus
ENSCPOG00000006790
N
0.000
MYT1L
Cavia porcellus
ENSCPOG00000013246
N
0.000
ENSCSAG00000006922
Chlorocebus sabaeus
ENSCSAG00000006922
N
0.000
ENSCSAG00000014731
Chlorocebus sabaeus
ENSCSAG00000014731
N
0.000
ENSCSAG00000016796
Chlorocebus sabaeus
ENSCSAG00000016796
N
0.000
myt1la
Danio rerio
ENSDARG00000008209
N
0.000
myt1a
Danio rerio
ENSDARG00000074030
N
0.000
myt1b
Danio rerio
ENSDARG00000102879
N
0.000
ST18
Dasypus novemcinctus
ENSDNOG00000009682
N
0.000
MYT1
Dasypus novemcinctus
ENSDNOG00000032037
N
0.000
MYT1L
Dasypus novemcinctus
ENSDNOG00000037275
N
0.000
St18
Dipodomys ordii
ENSDORG00000002635
N
0.000
Myt1
Dipodomys ordii
ENSDORG00000006425
N
0.000
ST18
Equus caballus
ENSECAG00000011546
N
0.000
MYT1
Equus caballus
ENSECAG00000013810
N
0.000
MYT1L
Equus caballus
ENSECAG00000014657
N
0.000
MYT1L
Erinaceus europaeus
ENSEEUG00000013615
N
0.000
ENSFALG00000002053
Ficedula albicollis
ENSFALG00000002053
N
0.000
ENSFALG00000010174
Ficedula albicollis
ENSFALG00000010174
N
0.000
ENSFALG00000010354
Ficedula albicollis
ENSFALG00000010354
N
0.000
MYT1
Felis catus
ENSFCAG00000001189
N
0.000
ST18
Felis catus
ENSFCAG00000008556
N
0.000
MYT1L
Felis catus
ENSFCAG00000013984
N
0.000
MYT1
Homo sapiens
ENSG00000196132
N
0.000
myt1la
Gasterosteus aculeatus
ENSGACG00000011952
N
0.000
myt1b
Gasterosteus aculeatus
ENSGACG00000013224
N
0.000
ENSGACG00000013255
Gasterosteus aculeatus
ENSGACG00000013255
N
0.000
MYT1
Gallus gallus
ENSGALG00000005932
N
0.000
ST18
Gallus gallus
ENSGALG00000015254
N
0.000
MYT1L
Gallus gallus
ENSGALG00000016384
N
0.000
ST18
Gorilla gorilla
ENSGGOG00000001223
N
0.000
MYT1
Gorilla gorilla
ENSGGOG00000006335
N
0.000
MYT1L
Gorilla gorilla
ENSGGOG00000026335
N
0.000
ENSGMOG00000006285
Gadus morhua
ENSGMOG00000006285
N
0.000
ENSGMOG00000012782
Gadus morhua
ENSGMOG00000012782
N
0.000
ENSLACG00000014372
Latimeria chalumnae
ENSLACG00000014372
N
0.000
MYT1L
Loxodonta africana
ENSLAFG00000002751
N
0.000
MYT1
Loxodonta africana
ENSLAFG00000022251
N
0.000
ENSLOCG00000005236
Lepisosteus oculatus
ENSLOCG00000005236
N
0.000
ENSLOCG00000005847
Lepisosteus oculatus
ENSLOCG00000005847
N
0.000
ENSLOCG00000017216
Lepisosteus oculatus
ENSLOCG00000017216
N
0.000
MYT1
Meleagris gallopavo
ENSMGAG00000006569
N
0.000
MYT1L
Meleagris gallopavo
ENSMGAG00000013972
N
0.000
MYT1
Microcebus murinus
ENSMICG00000003327
N
0.000
MYT1
Myotis lucifugus
ENSMLUG00000007626
N
0.000
MYT1L
Myotis lucifugus
ENSMLUG00000012642
N
0.000
ST18
Myotis lucifugus
ENSMLUG00000013211
N
0.000
MYT1
Macaca mulatta
ENSMMUG00000002315
N
0.000
ST18
Macaca mulatta
ENSMMUG00000008439
N
0.000
ST18
Monodelphis domestica
ENSMODG00000009635
N
0.000
MYT1L
Monodelphis domestica
ENSMODG00000014378
N
0.000
MYT1
Monodelphis domestica
ENSMODG00000017076
N
0.000
ENSMPUG00000006922
Mustela putorius furo
ENSMPUG00000006922
N
0.000
ENSMPUG00000008741
Mustela putorius furo
ENSMPUG00000008741
N
0.000
ENSMPUG00000012946
Mustela putorius furo
ENSMPUG00000012946
N
0.000
Myt1
Mus musculus
ENSMUSG00000010505
N
0.000
St18
Mus musculus
ENSMUSG00000033740
N
0.000
Myt1l
Mus musculus
ENSMUSG00000061911
N
0.000
ENSNLEG00000000678
Nomascus leucogenys
ENSNLEG00000000678
N
0.000
ENSNLEG00000008466
Nomascus leucogenys
ENSNLEG00000008466
N
0.000
ENSNLEG00000010244
Nomascus leucogenys
ENSNLEG00000010244
N
0.000
MYT1
Ornithorhynchus anatinus
ENSOANG00000004914
N
0.000
ST18
Ornithorhynchus anatinus
ENSOANG00000007275
N
0.000
ENSOANG00000009861
Ornithorhynchus anatinus
ENSOANG00000009861
N
0.000
ENSOARG00000007966
Ovis aries
ENSOARG00000007966
N
0.000
ENSOARG00000013407
Ovis aries
ENSOARG00000013407
N
0.000
ST18
Oryctolagus cuniculus
ENSOCUG00000013284
N
0.000
MYT1L
Oryctolagus cuniculus
ENSOCUG00000016764
N
0.000
MYT1
Oryctolagus cuniculus
ENSOCUG00000024866
N
0.000
MYT1L
Otolemur garnettii
ENSOGAG00000010219
N
0.000
MYT1
Otolemur garnettii
ENSOGAG00000011473
N
0.000
ST18
Otolemur garnettii
ENSOGAG00000012050
N
0.000
ENSONIG00000000499
Oreochromis niloticus
ENSONIG00000000499
N
0.000
ENSONIG00000009529
Oreochromis niloticus
ENSONIG00000009529
N
0.000
ENSONIG00000011639
Oreochromis niloticus
ENSONIG00000011639
N
0.000
ENSONIG00000011665
Oreochromis niloticus
ENSONIG00000011665
N
0.000
ENSONIG00000018694
Oreochromis niloticus
ENSONIG00000018694
N
0.000
ST18
Ochotona princeps
ENSOPRG00000001335
N
0.000
MYT1L
Ochotona princeps
ENSOPRG00000007706
N
0.000
myt1b
Oryzias latipes
ENSORLG00000002252
N
0.000
MYT1L
Oryzias latipes
ENSORLG00000017852
N
0.000
myt1la
Oryzias latipes
ENSORLG00000018130
N
0.000
myt1a
Oryzias latipes
ENSORLG00000020139
N
0.000
ENSPANG00000005639
Papio anubis
ENSPANG00000005639
N
0.000
ENSPANG00000005908
Papio anubis
ENSPANG00000005908
N
0.000
ENSPANG00000009233
Papio anubis
ENSPANG00000009233
N
0.000
MYT1L
Procavia capensis
ENSPCAG00000015124
N
0.000
ENSPFOG00000002613
Poecilia formosa
ENSPFOG00000002613
N
0.000
ENSPFOG00000005354
Poecilia formosa
ENSPFOG00000005354
N
0.000
ENSPFOG00000014046
Poecilia formosa
ENSPFOG00000014046
N
0.000
ENSPFOG00000016047
Poecilia formosa
ENSPFOG00000016047
N
0.000
ENSPFOG00000017045
Poecilia formosa
ENSPFOG00000017045
N
0.000
ENSPPYG00000011263
Pongo abelii
ENSPPYG00000011263
N
0.000
ENSPPYG00000012686
Pongo abelii
ENSPPYG00000012686
N
0.000
ENSPSIG00000005126
Pelodiscus sinensis
ENSPSIG00000005126
N
0.000
ENSPSIG00000010265
Pelodiscus sinensis
ENSPSIG00000010265
N
0.000
ENSPSIG00000011125
Pelodiscus sinensis
ENSPSIG00000011125
N
0.000
ST18
Pan troglodytes
ENSPTRG00000020245
N
0.000
MYT1
Pan troglodytes
ENSPTRG00000032477
N
0.000
ST18
Pteropus vampyrus
ENSPVAG00000013501
N
0.000
MYT1
Pteropus vampyrus
ENSPVAG00000017398
N
0.000
Myt1l
Rattus norvegicus
ENSRNOG00000004269
N
0.000
St18
Rattus norvegicus
ENSRNOG00000006200
N
0.000
Myt1
Rattus norvegicus
ENSRNOG00000017346
N
0.000
MYT1L
Sorex araneus
ENSSARG00000012319
N
0.000
ENSSHAG00000012193
Sarcophilus harrisii
ENSSHAG00000012193
N
0.000
ENSSHAG00000015142
Sarcophilus harrisii
ENSSHAG00000015142
N
0.000
ENSSHAG00000015433
Sarcophilus harrisii
ENSSHAG00000015433
N
0.000
ST18
Sus scrofa
ENSSSCG00000006266
N
0.000
MYT1L
Sus scrofa
ENSSSCG00000029334
N
0.000
ENSSTOG00000001345
Ictidomys tridecemlineatus
ENSSTOG00000001345
N
0.000
ENSSTOG00000008133
Ictidomys tridecemlineatus
ENSSTOG00000008133
N
0.000
ENSSTOG00000016500
Ictidomys tridecemlineatus
ENSSTOG00000016500
N
0.000
ENSTGUG00000007315
Taeniopygia guttata
ENSTGUG00000007315
N
0.000
ST18
Taeniopygia guttata
ENSTGUG00000010944
N
0.000
ENSTGUG00000012971
Taeniopygia guttata
ENSTGUG00000012971
N
0.000
myt1b
Tetraodon nigroviridis
ENSTNIG00000003105
N
0.000
ENSTNIG00000004354
Tetraodon nigroviridis
ENSTNIG00000004354
N
0.000
ST18
Tetraodon nigroviridis
ENSTNIG00000008501
N
0.000
myt1la
Tetraodon nigroviridis
ENSTNIG00000010716
N
0.000
MYT1
Takifugu rubripes
ENSTRUG00000002124
N
0.000
MYT1L
Takifugu rubripes
ENSTRUG00000003414
N
0.000
ST18
Takifugu rubripes
ENSTRUG00000006078
N
0.000
myt1a
Takifugu rubripes
ENSTRUG00000007068
N
0.000
myt1la
Takifugu rubripes
ENSTRUG00000015790
N
0.000
ENSTSYG00000006016
Tarsius syrichta
ENSTSYG00000006016
N
0.000
ENSTSYG00000008880
Tarsius syrichta
ENSTSYG00000008880
N
0.000
ENSTSYG00000010425
Tarsius syrichta
ENSTSYG00000010425
N
0.000
MYT1L
Tursiops truncatus
ENSTTRG00000008589
N
0.000
MYT1
Tursiops truncatus
ENSTTRG00000013408
N
0.000
ST18
Tursiops truncatus
ENSTTRG00000015387
N
0.000
ENSXMAG00000002367
Xiphophorus maculatus
ENSXMAG00000002367
N
0.000
ENSXMAG00000004301
Xiphophorus maculatus
ENSXMAG00000004301
N
0.000
ENSXMAG00000012857
Xiphophorus maculatus
ENSXMAG00000012857
N
0.000
ENSXMAG00000018975
Xiphophorus maculatus
ENSXMAG00000018975
N
0.000
GB48919
Apis mellifera
GB48919
N
0.000
HMEL002385
Heliconius melpomene
HMEL002385
N
0.000
L798_00492
Zootermopsis nevadensis
L798_00492
N
0.000
NV11201
Nasonia vitripennis
NV11201
N
0.000
Aan_R008628
Calypte anna
Aan_R008628
N
0.000
Aan_R012927
Calypte anna
Aan_R012927
N
0.000
Afo_R001804
Aptenodytes forsteri
Afo_R001804
N
0.000
Afo_R010888
Aptenodytes forsteri
Afo_R010888
N
0.000
Afo_R015783
Aptenodytes forsteri
Afo_R015783
N
0.000
Alligator_sinensis_CCG018588.1
Alligator sinensis
Alligator_sinensis_CCG018588.1
N
0.000
Brh_R002741
Buceros rhinoceros
Brh_R002741
N
0.000
Cflo_03590--XP_394358.3_APIME
Camponotus floridanus
Cflo_03590--XP_394358.3_APIME
N
0.000
ENSBTAP00000004603-D1
Bos grunniens
ENSBTAP00000004603-D1
N
0.000
ENSBTAP00000038860-D1
Bos grunniens
ENSBTAP00000038860-D1
N
0.000
ENSMMUP00000012198
Macaca fascicularis
ENSMMUP00000012198
N
0.000
ENSP00000276480-D1
Bos grunniens
ENSP00000276480-D1
N
0.000
ENSP00000276480
Macaca fascicularis
ENSP00000276480
N
0.000
ENSP00000327465
Macaca fascicularis
ENSP00000327465
N
0.000
Gfo_R002934
Geospiza fortis
Gfo_R002934
N
0.000
Gfo_R005271
Geospiza fortis
Gfo_R005271
N
0.000
Gfo_R012653
Geospiza fortis
Gfo_R012653
N
0.000
Hsal_01303--XP_394358.3_APIME
Harpegnathos saltator
Hsal_01303--XP_394358.3_APIME
N
0.000
Myotis_brandtii_MYT1_10023423
Myotis brandtii
Myotis_brandtii_MYT1_10023423
N
0.000
Myotis_brandtii_MYT1L_10020908
Myotis brandtii
Myotis_brandtii_MYT1L_10020908
N
0.000
Myotis_brandtii_ST18_10012485
Myotis brandtii
Myotis_brandtii_ST18_10012485
N
0.000
Ogr14932
Ophisaurus gracilis
Ogr14932
N
0.000
Pvit_03612
Pogona vitticeps
Pvit_03612
N
0.000
Pvit_15314
Pogona vitticeps
Pvit_15314
N
0.000
Tal_R003131
Tyto alba
Tal_R003131
N
0.000
estExt_fgenesh2_pg.C_1230027
Branchiostoma floridae
estExt_fgenesh2_pg.C_1230027
N
0.000
Sakowv30043989m.g
Saccoglossus kowalevskii
Sakowv30043989m.g
N
0.000
AAI70264
Xenopus laevis
AAI70264
N
0.000
myt1.S
Xenopus laevis
XB-GENE-1009978
N
0.000
XP_002934158
Xenopus tropicalis
XP_002934158
N
0.000
XP_002936343
Xenopus tropicalis
XP_002936343
N
0.000
XP_002942428
Xenopus tropicalis
XP_002942428
N
0.000