fgenesh1_pm.C_scaffold_2000778 (Arabidopsis lyrata)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03859 (CG-1) IPR005559 fgenesh1_pm.C_scaffold_2000778 T163175_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.C_scaffold_2000778 CG-1 51 165

Links

Other CG-1 family TFs
Other Arabidopsis lyrata TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Eucgr.H04623 Eucalyptus grandis Eucgr.H04623 N 0.737
Pm007031 Prunus mume Pm007031 N 0.737
cassava42936.valid.m1 Manihot esculenta cassava42936.valid.m1 N 0.746
cassava6546.valid.m1 Manihot esculenta cassava6546.valid.m1 N 0.763
Cucsa.349690 Cucumis sativus Cucsa.349690 N 0.781
mgf025436m Mimulus guttatus mgf025436m N 0.737
Aquca_040_00102 Aquilegia coerulea Aquca_040_00102 N 0.719
Cagra.1125s0011 Capsella grandiflora Cagra.1125s0011 N 0.947
Carubv10022369m.g Capsella rubella Carubv10022369m.g N 0.939
Ciclev10030636m.g Citrus clementina Ciclev10030636m.g N 0.772
Cla000701 Citrullus lanatus Cla000701 N 0.702
evm.TU.supercontig_43.77 Carica papaya evm.TU.supercontig_43.77 N 0.781
Gorai.009G332200 Gossypium raimondii Gorai.009G332200 N 0.763
MDP0000262800 Malus domestica MDP0000262800 N 0.719
orange1.1g044976m.g Citrus sinensis orange1.1g044976m.g N 0.772
SapurV1A.0056s0050 Salix purpurea SapurV1A.0056s0050 N 0.711
SapurV1A.1172s0010 Salix purpurea SapurV1A.1172s0010 N 0.737
SapurV1A.1460s0040 Salix purpurea SapurV1A.1460s0040 N 0.746
Thhalv10018053m.g Eutrema salsugineum Thhalv10018053m.g N 0.877
PK06349.1 Cannabis sativa PK06349.1 N 0.719
POPTR_0001s13700 Populus trichocarpa POPTR_0001s13700 N 0.746
Bo2g055720 Brassica oleracea Bo2g055720 N 0.833
Bo6g099030 Brassica oleracea Bo6g099030 N 0.825
Bo6g103720 Brassica oleracea Bo6g103720 N 0.789
Bra004096 Brassica rapa Bra004096 N 0.816
Bra004217 Brassica rapa Bra004217 N 0.781
Bra034007 Brassica rapa Bra034007 N 0.833
GLYMA05G28090 Glycine max GLYMA05G28090 N 0.763
GSMUA_Achr9G01330_001 Musa acuminata GSMUA_Achr9G01330_001 N 0.702
MTR_8g080800 Medicago truncatula MTR_8g080800 N 0.763
CMTA4 Arabidopsis thaliana AT1G67310 N 0.974
POPTR_0003s16910 Populus trichocarpa POPTR_0003s16910 N 0.719
PRUPE_ppa000516mg Prunus persica PRUPE_ppa000516mg N 0.737
Si009249m.g Setaria italica Si009249m.g N 0.702
Solyc05g015650.2 Solanum lycopersicum Solyc05g015650.2 N 0.746
Solyc12g035520.1 Solanum lycopersicum Solyc12g035520.1 N 0.719
TCM_008731 Theobroma cacao TCM_008731 N 0.737
VIT_01s0010g03850 Vitis vinifera VIT_01s0010g03850 N 0.746
Ca_08511 Cicer arietinum Ca_08511 N 0.763