CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_3g085050
(
Medicago truncatula
)
CG-1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03859 (CG-1)
IPR005559
MTR_3g085050
T163254_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AES72007
CG-1
15
129
EAKKRWLKPIEVLYILQNHDTCKFTDFPLNQPRGGSVYLFNKRVMRFFRKDGHNWRKKKDGRTVSEAHERLKVGNVEALNCYYAHGEENRSFQRRSYWMLNPEYEHVVLVHYRET
KEH35249
CG-1
15
129
EAKKRWLKPIEVLYILQNHDTCKFTDFPLNQPRGGSVYLFNKRVMRFFRKDGHNWRKKKDGRTVSEAHERLKVGNVEALNCYYAHGEENRSFQRRSYWMLNPEYEHVVLVHYRET
Links
Other
CG-1
family TFs
Other
Medicago truncatula
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA024846
Oryza indica
BGIOSGA024846
N
GRMZM2G051793
Zea mays
GRMZM2G051793
N
OB07G12010
Oryza brachyantha
OB07G12010
N
OBART07G02450
Oryza barthii
OBART07G02450
N
OGLUM07G14260
Oryza glumaepatula
OGLUM07G14260
N
OLONG_009970
Oryza longistaminata
OLONG_009970
N
OMERI01G11970
Oryza meridionalis
OMERI01G11970
N
ONIVA04G19340
Oryza nivara
ONIVA04G19340
N
OPUNC07G02500
Oryza punctata
OPUNC07G02500
N
ORGLA07G0021600
Oryza glaberrima
ORGLA07G0021600
N
ORUFI07G02320
Oryza rufipogon
ORUFI07G02320
N
Si028919m.g
Setaria italica
Si028919m.g
N
Pavir.Ba03827
Panicum virgatum
Pavir.Ba03827
N
Pavir.Bb00243
Panicum virgatum
Pavir.Bb00243
N