CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SPAL_0001233100
(
Strongyloides papillosus
)
DM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00751 (DM)
IPR001275
SPAL_0001233100
T170035_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WUBG_11979
M01922_2.00
Wuchereria bancrofti
ATGTWTCA
TGAWACAT
PBM
Weirauch et al.(2014)
pTH9296
0.953
0.851
Bm2567
M01923_2.00
Brugia malayi
NNNWGTTKHN
NDMAACWNNN
PBM
Weirauch et al.(2014)
pTH9246
0.951
0.830
CBG09413
M01924_2.00
Caenorhabditis briggsae
AATGTTTC
GAAACATT
PBM
Weirauch et al.(2014)
pTH8330
0.944
0.830
CBN06605
M01925_2.00
Caenorhabditis brenneri
NWGTWKN
NMWACWN
PBM
Weirauch et al.(2014)
pTH9247
0.942
0.830
CJA05633_CONSTRUCT
M01936_2.00
PBM CONSTRUCTS
NWGTWDN
NHWACWN
PBM
Weirauch et al.(2014)
pTH9344
0.942
0.830
dmd-10
M00657_2.00
Caenorhabditis elegans
AWTGTTTC
GAAACAWT
PBM
Narasimhan et al.(2015)
pTH9142
0.938
0.809
dmd-3
M00658_2.00
Caenorhabditis elegans
NNWGTWDN
NHWACWNN
PBM
Narasimhan et al.(2015)
pTH10638
0.915
0.723
For this family, TFs with SR scores >
0.845
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SPAL_0001233100.1
DM
72
118
RVPNCQKCGQHGIKSRLKGHKRVCRFKDCNCPKCQVVTERQKLMADQ
Links
Other
DM
family TFs
Other
Strongyloides papillosus
TFs
47 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bm2567
Brugia malayi
Bm2567
D
0.951
CJA05633_CONSTRUCT
PBM CONSTRUCTS
CJA05633_CONSTRUCT
D
0.942
dmd-3
Caenorhabditis elegans
WBGene00012832
D
0.915
dmd-10
Caenorhabditis elegans
WBGene00007929
D
0.938
WUBG_11979
Wuchereria bancrofti
WUBG_11979
D
0.953
CBN06605
Caenorhabditis brenneri
CBN06605
D
0.942
CBG09413
Caenorhabditis briggsae
CBG09413
D
0.944
TELCIR_05158
Teladorsagia circumcincta
TELCIR_05158
I
0.915
L892_g27879
Steinernema scapterisci
L892_g27879
I
0.921
L893_g31098
Steinernema glaseri
L893_g31098
I
0.945
L898_g30067
Steinernema monticolum
L898_g30067
I
0.921
L892_g22881
Steinernema scapterisci
L892_g22881
I
0.942
L898_g33808
Steinernema monticolum
L898_g33808
I
0.942
nAv.1.0.1.g01085
Acanthocheilonema viteae
nAv.1.0.1.g01085
I
0.910
nAv.1.0.1.g09212
Acanthocheilonema viteae
nAv.1.0.1.g09212
I
0.953
NBR_0000774001
Nippostrongylus brasiliensis
NBR_0000774001
I
0.955
nDi.2.2.2.g08811
Dirofilaria immitis
nDi.2.2.2.g08811
I
0.953
nDi.2.2.2.g10419
Dirofilaria immitis
nDi.2.2.2.g10419
I
0.910
NECAME_07661
Necator americanus
NECAME_07661
I
0.915
nLs.2.1.2.g05589
Litomosoides sigmodontis
nLs.2.1.2.g05589
I
0.951
nOo.2.0.1.g05035
Onchocerca ochengi
nOo.2.0.1.g05035
I
0.953
nOo.2.0.1.g12565
Onchocerca ochengi
nOo.2.0.1.g12565
I
0.910
OESDEN_09202
Oesophagostomum dentatum
OESDEN_09202
I
0.908
PTRK_0001597400
Parastrongyloides trichosuri
PTRK_0001597400
I
0.967
SVE_0753200
Strongyloides venezuelensis
SVE_0753200
I
0.969
SVE_1703300
Strongyloides venezuelensis
SVE_1703300
I
0.890
TCLT_0000243901
Thelazia callipaeda
TCLT_0000243901
I
0.953
ASIM_0001608201
Anisakis simplex
ASIM_0001608201
I
0.951
CJA05020
Caenorhabditis japonica
CJA05020
I
0.915
CJA37832
Caenorhabditis japonica
CJA37832
I
0.915
CRE31027
Caenorhabditis remanei
CRE31027
I
0.942
LOAG_11460
Loa loa
LOAG_11460
I
0.953
WBGene00242643
Onchocerca volvulus
WBGene00242643
I
0.953
ANCCAN_13991
Ancylostoma caninum
ANCCAN_13991
I
0.915
ANCDUO_19569
Ancylostoma duodenale
ANCDUO_19569
I
0.915
ASIM_0000241101
Anisakis simplex
ASIM_0000241101
I
0.916
ASIM_0000264301
Anisakis simplex
ASIM_0000264301
I
0.916
L889_g10733
Steinernema feltiae
L889_g10733
I
0.942
BTMF_0001653601
Brugia timori
BTMF_0001653601
I
0.951
BTMF_0001659501
Brugia timori
BTMF_0001659501
I
0.910
BXY_0200700
Bursaphelenchus xylophilus
BXY_0200700
I
0.955
BXY_0352300
Bursaphelenchus xylophilus
BXY_0352300
I
0.890
DME_0001004201
Dracunculus medinensis
DME_0001004201
I
0.953
EEL_0000689901
Elaeophora elaphi
EEL_0000689901
I
0.953
EVEC_0001123001
Enterobius vermicularis
EVEC_0001123001
I
0.953
Hba_18605
Heterorhabditis bacteriophora
Hba_18605
I
0.950
L596_g998
Steinernema carpocapsae
L596_g998
I
0.942