fgenesh1_pg.scaffold_121000063 (Physcomitrella patens)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02319 (E2F_TDP) IPR003316 fgenesh1_pg.scaffold_121000063 T173836_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
E2FE
M01958_2.00 		Arabidopsis thaliana
HDSGCGCSHD
HDSGCGCSHD		 PBM
Weirauch et al.(2014)
pTH8176 		0.626 0.626
E2F7
M02960_2.00 		Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW		 SELEX
Jolma et al.(2013)
E2F7_1 		0.626 0.626
E2F7
M04705_2.00 		Homo sapiens
WTTTGGCGGGAAAN
NTTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F7_eDBD_HT-SELEX 		0.626 0.626
E2FE
M06873_2.00 		Arabidopsis thaliana
TTTTGGCGGGAAAWWNWNDDN
NHHNWNWWTTTCCCGCCAAAA		 Dap-seq
OMalley et al.(2016)
DEL1_col_a 		0.626 0.626
E2FE
M06874_2.00 		Arabidopsis thaliana
DTTTTGGCGGGAAAA
TTTTCCCGCCAAAAH		 Dap-seq
OMalley et al.(2016)
DEL1_colamp_a 		0.626 0.626
E2F7
M09033_2.00 		Homo sapiens
NDGGCGGGRRNDV
BHNYYCCCGCCHN		 Misc
Kulakovskiy et al.(2013)
E2F7_HUMAN.H11MO.0.B 		0.626 0.626
E2f7
M09040_2.00 		Mus musculus
NDGGCGGGRRNDV
BHNYYCCCGCCHN		 Misc
Kulakovskiy et al.(2013)
E2F7_MOUSE.H11MO.0.C 		0.626 0.626
E2F7
M09522_2.00 		Homo sapiens
NSGCGSGAAMNN
NNKTTCSCGCSN		 Misc
Heinz et al.(2010)
Hela-E2F7_GSE32673 		0.626 0.626
E2F7
M04706_2.00 		Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F7_eDBD_Methyl-HT-SELEX 		0.626 0.626
E2F8
M02959_2.00 		Homo sapiens
TTTGGCGGGAAA
TTTCCCGCCAAA		 SELEX
Jolma et al.(2013)
E2F8_1 		0.618 0.618
E2F8
M04703_2.00 		Homo sapiens
WDKTGGCGGGARNN
NNYTCCCGCCAMHW		 SELEX
Yin et al.(2017)
E2F8_eDBD_HT-SELEX 		0.618 0.618
E2F8
M04704_2.00 		Homo sapiens
WTTTGGCGGGAAWN
NWTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F8_eDBD_Methyl-HT-SELEX 		0.618 0.618
E2FD
M06875_2.00 		Arabidopsis thaliana
DWWHDDTTTTGGCGGGAAAW
WTTTCCCGCCAAAAHHDWWH		 Dap-seq
OMalley et al.(2016)
DEL2_col_a 		0.527 0.527
E2FD
M06876_2.00 		Arabidopsis thaliana
DTTTTGGCGGGAAAA
TTTTCCCGCCAAAAH		 Dap-seq
OMalley et al.(2016)
DEL2_colamp_a 		0.527 0.527
E2FD
M10442_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$E2L1_Q2 		0.527 0.527
E2FD
M10443_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$E2L_Q2 		0.527 0.527
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.scaffold_121000063 E2F 115 187
fgenesh1_pg.scaffold_121000063 E2F 297 376

Links

Other E2F family TFs
Other Physcomitrella patens TFs

319 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TVAG_304110 Trichomonas vaginalis TVAG_304110 I 0.000
TVAG_474270 Trichomonas vaginalis TVAG_474270 I 0.000
TVAG_004330 Trichomonas vaginalis TVAG_004330 N 0.000
TVAG_006520 Trichomonas vaginalis TVAG_006520 N 0.000
TVAG_007060 Trichomonas vaginalis TVAG_007060 N 0.000
TVAG_015360 Trichomonas vaginalis TVAG_015360 N 0.000
TVAG_018730 Trichomonas vaginalis TVAG_018730 N 0.000
TVAG_022640 Trichomonas vaginalis TVAG_022640 N 0.000
TVAG_022870 Trichomonas vaginalis TVAG_022870 N 0.000
TVAG_023890 Trichomonas vaginalis TVAG_023890 N 0.000
TVAG_025350 Trichomonas vaginalis TVAG_025350 N 0.000
TVAG_030270 Trichomonas vaginalis TVAG_030270 N 0.000
TVAG_030650 Trichomonas vaginalis TVAG_030650 N 0.000
TVAG_045200 Trichomonas vaginalis TVAG_045200 N 0.000
TVAG_051380 Trichomonas vaginalis TVAG_051380 N 0.000
TVAG_055730 Trichomonas vaginalis TVAG_055730 N 0.000
TVAG_057510 Trichomonas vaginalis TVAG_057510 N 0.000
TVAG_058980 Trichomonas vaginalis TVAG_058980 N 0.000
TVAG_065250 Trichomonas vaginalis TVAG_065250 N 0.000
TVAG_065540 Trichomonas vaginalis TVAG_065540 N 0.000
TVAG_069420 Trichomonas vaginalis TVAG_069420 N 0.000
TVAG_075700 Trichomonas vaginalis TVAG_075700 N 0.000
TVAG_077710 Trichomonas vaginalis TVAG_077710 N 0.000
TVAG_078220 Trichomonas vaginalis TVAG_078220 N 0.000
TVAG_081270 Trichomonas vaginalis TVAG_081270 N 0.000
TVAG_084310 Trichomonas vaginalis TVAG_084310 N 0.000
TVAG_085010 Trichomonas vaginalis TVAG_085010 N 0.000
TVAG_086760 Trichomonas vaginalis TVAG_086760 N 0.000
TVAG_092250 Trichomonas vaginalis TVAG_092250 N 0.000
TVAG_095370 Trichomonas vaginalis TVAG_095370 N 0.000
TVAG_096560 Trichomonas vaginalis TVAG_096560 N 0.000
TVAG_109190 Trichomonas vaginalis TVAG_109190 N 0.000
TVAG_117610 Trichomonas vaginalis TVAG_117610 N 0.000
TVAG_117870 Trichomonas vaginalis TVAG_117870 N 0.000
TVAG_128100 Trichomonas vaginalis TVAG_128100 N 0.000
TVAG_129250 Trichomonas vaginalis TVAG_129250 N 0.000
TVAG_131780 Trichomonas vaginalis TVAG_131780 N 0.000
TVAG_133720 Trichomonas vaginalis TVAG_133720 N 0.000
TVAG_138460 Trichomonas vaginalis TVAG_138460 N 0.000
TVAG_141080 Trichomonas vaginalis TVAG_141080 N 0.000
TVAG_141640 Trichomonas vaginalis TVAG_141640 N 0.000
TVAG_152080 Trichomonas vaginalis TVAG_152080 N 0.000
TVAG_152850 Trichomonas vaginalis TVAG_152850 N 0.000
TVAG_155260 Trichomonas vaginalis TVAG_155260 N 0.000
TVAG_155470 Trichomonas vaginalis TVAG_155470 N 0.000
TVAG_172760 Trichomonas vaginalis TVAG_172760 N 0.000
TVAG_173010 Trichomonas vaginalis TVAG_173010 N 0.000
TVAG_181790 Trichomonas vaginalis TVAG_181790 N 0.000
TVAG_181810 Trichomonas vaginalis TVAG_181810 N 0.000
TVAG_189450 Trichomonas vaginalis TVAG_189450 N 0.000
TVAG_194050 Trichomonas vaginalis TVAG_194050 N 0.000
TVAG_199660 Trichomonas vaginalis TVAG_199660 N 0.000
TVAG_202410 Trichomonas vaginalis TVAG_202410 N 0.000
TVAG_208390 Trichomonas vaginalis TVAG_208390 N 0.000
TVAG_209630 Trichomonas vaginalis TVAG_209630 N 0.000
TVAG_210220 Trichomonas vaginalis TVAG_210220 N 0.000
TVAG_218370 Trichomonas vaginalis TVAG_218370 N 0.000
TVAG_230320 Trichomonas vaginalis TVAG_230320 N 0.000
TVAG_231870 Trichomonas vaginalis TVAG_231870 N 0.000
TVAG_233530 Trichomonas vaginalis TVAG_233530 N 0.000
TVAG_236380 Trichomonas vaginalis TVAG_236380 N 0.000
TVAG_241060 Trichomonas vaginalis TVAG_241060 N 0.000
TVAG_255040 Trichomonas vaginalis TVAG_255040 N 0.000
TVAG_264410 Trichomonas vaginalis TVAG_264410 N 0.000
TVAG_269480 Trichomonas vaginalis TVAG_269480 N 0.000
TVAG_269580 Trichomonas vaginalis TVAG_269580 N 0.000
TVAG_272550 Trichomonas vaginalis TVAG_272550 N 0.000
TVAG_278760 Trichomonas vaginalis TVAG_278760 N 0.000
TVAG_279620 Trichomonas vaginalis TVAG_279620 N 0.000
TVAG_285040 Trichomonas vaginalis TVAG_285040 N 0.000
TVAG_307820 Trichomonas vaginalis TVAG_307820 N 0.000
TVAG_317130 Trichomonas vaginalis TVAG_317130 N 0.000
TVAG_331810 Trichomonas vaginalis TVAG_331810 N 0.000
TVAG_332350 Trichomonas vaginalis TVAG_332350 N 0.000
TVAG_346350 Trichomonas vaginalis TVAG_346350 N 0.000
TVAG_348790 Trichomonas vaginalis TVAG_348790 N 0.000
TVAG_353210 Trichomonas vaginalis TVAG_353210 N 0.000
TVAG_355410 Trichomonas vaginalis TVAG_355410 N 0.000
TVAG_355880 Trichomonas vaginalis TVAG_355880 N 0.000
TVAG_355890 Trichomonas vaginalis TVAG_355890 N 0.000
TVAG_356990 Trichomonas vaginalis TVAG_356990 N 0.000
TVAG_357700 Trichomonas vaginalis TVAG_357700 N 0.000
TVAG_361810 Trichomonas vaginalis TVAG_361810 N 0.000
TVAG_364890 Trichomonas vaginalis TVAG_364890 N 0.000
TVAG_366530 Trichomonas vaginalis TVAG_366530 N 0.000
TVAG_366770 Trichomonas vaginalis TVAG_366770 N 0.000
TVAG_367290 Trichomonas vaginalis TVAG_367290 N 0.000
TVAG_368880 Trichomonas vaginalis TVAG_368880 N 0.000
TVAG_370220 Trichomonas vaginalis TVAG_370220 N 0.000
TVAG_376580 Trichomonas vaginalis TVAG_376580 N 0.000
TVAG_377000 Trichomonas vaginalis TVAG_377000 N 0.000
TVAG_377090 Trichomonas vaginalis TVAG_377090 N 0.000
TVAG_381530 Trichomonas vaginalis TVAG_381530 N 0.000
TVAG_382960 Trichomonas vaginalis TVAG_382960 N 0.000
TVAG_385530 Trichomonas vaginalis TVAG_385530 N 0.000
TVAG_400660 Trichomonas vaginalis TVAG_400660 N 0.000
TVAG_401510 Trichomonas vaginalis TVAG_401510 N 0.000
TVAG_405610 Trichomonas vaginalis TVAG_405610 N 0.000
TVAG_418100 Trichomonas vaginalis TVAG_418100 N 0.000
TVAG_424630 Trichomonas vaginalis TVAG_424630 N 0.000
TVAG_425150 Trichomonas vaginalis TVAG_425150 N 0.000
TVAG_433330 Trichomonas vaginalis TVAG_433330 N 0.000
TVAG_437540 Trichomonas vaginalis TVAG_437540 N 0.000
TVAG_438970 Trichomonas vaginalis TVAG_438970 N 0.000
TVAG_439000 Trichomonas vaginalis TVAG_439000 N 0.000
TVAG_439290 Trichomonas vaginalis TVAG_439290 N 0.000
TVAG_440300 Trichomonas vaginalis TVAG_440300 N 0.000
TVAG_449370 Trichomonas vaginalis TVAG_449370 N 0.000
TVAG_450870 Trichomonas vaginalis TVAG_450870 N 0.000
TVAG_454650 Trichomonas vaginalis TVAG_454650 N 0.000
TVAG_458610 Trichomonas vaginalis TVAG_458610 N 0.000
TVAG_469490 Trichomonas vaginalis TVAG_469490 N 0.000
TVAG_472310 Trichomonas vaginalis TVAG_472310 N 0.000
TVAG_484220 Trichomonas vaginalis TVAG_484220 N 0.000
TVAG_484250 Trichomonas vaginalis TVAG_484250 N 0.000
TVAG_488780 Trichomonas vaginalis TVAG_488780 N 0.000
TVAG_499220 Trichomonas vaginalis TVAG_499220 N 0.000
TVAG_500620 Trichomonas vaginalis TVAG_500620 N 0.000
TVAG_511200 Trichomonas vaginalis TVAG_511200 N 0.000
TVAG_513300 Trichomonas vaginalis TVAG_513300 N 0.000
TVAG_514390 Trichomonas vaginalis TVAG_514390 N 0.000
TVAG_517040 Trichomonas vaginalis TVAG_517040 N 0.000
TVAG_520380 Trichomonas vaginalis TVAG_520380 N 0.000
TVAG_521260 Trichomonas vaginalis TVAG_521260 N 0.000
TVAG_521560 Trichomonas vaginalis TVAG_521560 N 0.000
TVAG_527500 Trichomonas vaginalis TVAG_527500 N 0.000
TVAG_534250 Trichomonas vaginalis TVAG_534250 N 0.000
TVAG_538000 Trichomonas vaginalis TVAG_538000 N 0.000
TVAG_540060 Trichomonas vaginalis TVAG_540060 N 0.000
TVAG_540620 Trichomonas vaginalis TVAG_540620 N 0.000
TVAG_552960 Trichomonas vaginalis TVAG_552960 N 0.000
TVAG_559230 Trichomonas vaginalis TVAG_559230 N 0.000
TVAG_559790 Trichomonas vaginalis TVAG_559790 N 0.000
TVAG_565490 Trichomonas vaginalis TVAG_565490 N 0.000
TVAG_571460 Trichomonas vaginalis TVAG_571460 N 0.000
TVAG_571520 Trichomonas vaginalis TVAG_571520 N 0.000
TVAG_575020 Trichomonas vaginalis TVAG_575020 N 0.000
TVAG_579320 Trichomonas vaginalis TVAG_579320 N 0.000
TVAG_579820 Trichomonas vaginalis TVAG_579820 N 0.000
TVAG_581530 Trichomonas vaginalis TVAG_581530 N 0.000
TVAG_584420 Trichomonas vaginalis TVAG_584420 N 0.000
TVAG_586700 Trichomonas vaginalis TVAG_586700 N 0.000
TVAG_593090 Trichomonas vaginalis TVAG_593090 N 0.000
TVAG_595620 Trichomonas vaginalis TVAG_595620 N 0.000
TVAG_596600 Trichomonas vaginalis TVAG_596600 N 0.000
TVAG_597840 Trichomonas vaginalis TVAG_597840 N 0.000