SPU_004702 (Strongylocentrotus purpuratus)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF16422 (COE1_DBD) (none) SPU_004702 T174778_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EBF3
M10461_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF_Q6 		0.819 0.819
Ebf1
M09045_2.00 		Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH		 Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A 		0.805 0.805
Ebf1
M09527_2.00 		Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH		 Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978 		0.805 0.805
EBF4
M10460_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_02 		0.805 0.805
Ebf1
M10469_2.00 		Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB		 Transfac
Matys et al.(2006)
V$OLF1_01 		0.805 0.805
Ebf4
M10468_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_01 		0.801 0.801
kn
M03721_2.00 		Drosophila melanogaster
BWATTCCCHDGGGAATWV
BWATTCCCHDGGGAATWV		 SELEX
Nitta et al.(2015)
kn_1 		0.774 0.774
Ebf2
M10467_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_01 		0.761 0.761
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SPU_004702-tr EBF1 22 247

Links

Other EBF1 family TFs
Other Strongylocentrotus purpuratus TFs

352 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
WUBG_05438 Wuchereria bancrofti WUBG_05438 N 0.000
WUBG_18983 Wuchereria bancrofti WUBG_18983 N 0.000
ENSAPLG00000008726 Anas platyrhynchos ENSAPLG00000008726 N 0.000
GD16116 Drosophila simulans FBgn0187752 N 0.000
Afo_R014138 Aptenodytes forsteri Afo_R014138 N 0.000
Myotis_brandtii_TBX4_10031053 Myotis brandtii Myotis_brandtii_TBX4_10031053 N 0.000
Minc08191 Meloidogyne incognita Minc08191 N 0.000
BTMF_0001726401 Brugia timori BTMF_0001726401 N 0.000
GPUH_0002705801 Gongylonema pulchrum GPUH_0002705801 N 0.000
PEQ_0001168701 Parascaris equorum PEQ_0001168701 N 0.000
SMTD_0000415401 Schistosoma mattheei SMTD_0000415401 N 0.000
SPER_0000972801 Spirometra erinaceieuropaei SPER_0000972801 N 0.000
TCNE_0001513701 Toxocara canis TCNE_0001513701 N 0.000