LDEC007542 (Leptinotarsa decemlineata)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF16422 (COE1_DBD) (none) LDEC007542 T174850_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
kn
M03721_2.00 		Drosophila melanogaster
BWATTCCCHDGGGAATWV
BWATTCCCHDGGGAATWV		 SELEX
Nitta et al.(2015)
kn_1 		0.857 0.857
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LDEC007542-PA EBF1 5 46

Links

Other EBF1 family TFs
Other Leptinotarsa decemlineata TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK20225.1 Cannabis sativa PK20225.1 D 0.000
PK07858.1 Cannabis sativa PK07858.1 D 0.000
Gorai.009G163400 Gossypium raimondii Gorai.009G163400 I 0.000
cassava32077.m1 Manihot esculenta cassava32077.m1 I 0.000
Gorai.008G186700 Gossypium raimondii Gorai.008G186700 I 0.000
evm.TU.supercontig_7.53 Carica papaya evm.TU.supercontig_7.53 I 0.000
evm.TU.supercontig_53.118 Carica papaya evm.TU.supercontig_53.118 I 0.000
Eucgr.G02351 Eucalyptus grandis Eucgr.G02351 I 0.000
Eucgr.E02743 Eucalyptus grandis Eucgr.E02743 I 0.000
Eucgr.D00509 Eucalyptus grandis Eucgr.D00509 I 0.000
Ciclev10031900m.g Citrus clementina Ciclev10031900m.g I 0.000
Ciclev10016289m.g Citrus clementina Ciclev10016289m.g I 0.000
Aquca_002_01095 Aquilegia coerulea Aquca_002_01095 I 0.000
mgf017635m Mimulus guttatus mgf017635m I 0.000
Cucsa.283920 Cucumis sativus Cucsa.283920 I 0.000
Cucsa.213230 Cucumis sativus Cucsa.213230 I 0.000
Cucsa.200860 Cucumis sativus Cucsa.200860 I 0.000
cassava46299.m1 Manihot esculenta cassava46299.m1 I 0.000
cassava18812.valid.m1 Manihot esculenta cassava18812.valid.m1 I 0.000
Gorai.011G034000 Gossypium raimondii Gorai.011G034000 I 0.000
Gorai.013G079600 Gossypium raimondii Gorai.013G079600 I 0.000
Lus10001885.g Linum usitatissimum Lus10001885.g I 0.000
Lus10013917.g Linum usitatissimum Lus10013917.g I 0.000
Lus10021711.g Linum usitatissimum Lus10021711.g I 0.000
Lus10035056.g Linum usitatissimum Lus10035056.g I 0.000
MDP0000249969 Malus domestica MDP0000249969 I 0.000
MDP0000271420 Malus domestica MDP0000271420 I 0.000
MDP0000319726 Malus domestica MDP0000319726 I 0.000
orange1.1g024670m.g Citrus sinensis orange1.1g024670m.g I 0.000
orange1.1g037785m.g Citrus sinensis orange1.1g037785m.g I 0.000
SapurV1A.0079s0530 Salix purpurea SapurV1A.0079s0530 I 0.000
SapurV1A.0304s0070 Salix purpurea SapurV1A.0304s0070 I 0.000
SapurV1A.1185s0010 Salix purpurea SapurV1A.1185s0010 I 0.000
SapurV1A.1821s0030 Salix purpurea SapurV1A.1821s0030 I 0.000
SapurV1A.3056s0010 Salix purpurea SapurV1A.3056s0010 I 0.000
GSMUA_Achr6G30610_001 Musa acuminata GSMUA_Achr6G30610_001 I 0.000
AMTR_s00007p00170710 Amborella trichopoda AMTR_s00007p00170710 I 0.000
POPTR_0008s11490 Populus trichocarpa POPTR_0008s11490 I 0.000
PGSC0003DMG400007457 Solanum tuberosum PGSC0003DMG400007457 I 0.000
MTR_2g015890 Medicago truncatula MTR_2g015890 I 0.000
MTR_1g093750 Medicago truncatula MTR_1g093750 I 0.000
LPERR01G07000 Leersia perrieri LPERR01G07000 I 0.000
GSMUA_Achr7G10740_001 Musa acuminata GSMUA_Achr7G10740_001 I 0.000
GSMUA_Achr7G07280_001 Musa acuminata GSMUA_Achr7G07280_001 I 0.000
POPTR_0010s14010 Populus trichocarpa POPTR_0010s14010 I 0.000
GSMUA_Achr1G21280_001 Musa acuminata GSMUA_Achr1G21280_001 I 0.000
GSMUA_Achr11G13440_001 Musa acuminata GSMUA_Achr11G13440_001 I 0.000
GLYMA20G32660 Glycine max GLYMA20G32660 I 0.000
GLYMA10G34910 Glycine max GLYMA10G34910 I 0.000
GLYMA07G32690 Glycine max GLYMA07G32690 I 0.000
GLYMA02G15780 Glycine max GLYMA02G15780 I 0.000
AMTR_s00101p00150740 Amborella trichopoda AMTR_s00101p00150740 I 0.000
Ca_08440 Cicer arietinum Ca_08440 I 0.000
cassava16550.m1 Manihot esculenta cassava16550.m1 I 0.000
29900.m001610 Ricinus communis 29900.m001610 I 0.000
29738.m001043 Ricinus communis 29738.m001043 I 0.000
Pm029004 Prunus mume Pm029004 I 0.000
Cla020671 Citrullus lanatus Cla020671 I 0.000
Cla019977 Citrullus lanatus Cla019977 I 0.000
Cla013743 Citrullus lanatus Cla013743 I 0.000
PRUPE_ppa019406mg Prunus persica PRUPE_ppa019406mg I 0.000
Ca_06386 Cicer arietinum Ca_06386 I 0.000
VIT_14s0068g01580 Vitis vinifera VIT_14s0068g01580 I 0.000
VIT_01s0011g02940 Vitis vinifera VIT_01s0011g02940 I 0.000
TCM_029711 Theobroma cacao TCM_029711 I 0.000
TCM_011873 Theobroma cacao TCM_011873 I 0.000
SELMODRAFT_56610 Selaginella moellendorffii SELMODRAFT_56610 I 0.000
SELMODRAFT_46532 Selaginella moellendorffii SELMODRAFT_46532 I 0.000
GSMUA_Achr2G20040_001 Musa acuminata GSMUA_Achr2G20040_001 N 0.000